| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6706 |
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| Symbol | prpB |
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| ID | 6248240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 1311444 |
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| End bp | 1312337 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642598375 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_001862777 |
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| Protein GI | 186471459 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTCAA CCAGACAACC CATCAGCGCC GGCGCGGCAT TCCGCCAGGC CGTCGCAGAA
GGACAACCGC TGCAGGTCGT CGGCGCAATC ACCGCCTACG CCGCGAAAAT GGCCGAAGCA
GTCGGCTTCA AGGCCGTGTA CCTGTCGGGC GGCGGCGTCG CCGCGAACTC GCTCGGCATC
CCCGATCTCG GCATCAGCAC AATGGACGAC GTGCTGATCG ACGCCCGACG CATCACCGAC
GCCACCCACC TGCCGCTGCT CGTCGATATC GACACCGGCT GGGGCGGCGC CTTCAATATT
GCGCGCACGG TCCGCTCGTT CATCAAGGCG GGTGTCGCTG CCGTTCACCT CGAAGACCAG
GTGGGGCAGA AACGCTGCGG CCATCGTCCG AATAAGGAAG TGGTCGCGAC GCAAGAGATG
GTGGATCGCG TGAAGGCTGC CGTCGACGCG CGCACCGACG ATCAGTTCGT CATCATGGCC
CGCACCGACG CCGCCGCCGC CGAAGGACTC GACGCCGCGA TCGAGCGCGC CGTCGCCTAT
GTCGAAGCCG GTGCCGACAT GATCTTCCCG GAAGCGATGC GAACACTCGA CGACTATCGC
AAGTTCAAGG CCGCCGTGAA GGTGCCGATT CTCGCGAACC TGACCGAGTT CGGCACGACG
CCATTCTTTA CGACGACGGA ACTGCGCGAC GCGAACGTCG ATATCGCGTT GTATTGCTGC
GGGGCATATC GCGCGATGAA CGCGGCCGCC CTCAACTTCT ACGAAACGAC GATGCGCGAC
GGCACTCAAA AGGCCGCGGT GCCGACGATG CAGACGCGCG AAGATCTCTA CAAATATCTT
GGCTATCACG CGTACGAAGA CAAACTCGAC GCGCTGTTCG CCGCCAACAA GTAA
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| Protein sequence | MNSTRQPISA GAAFRQAVAE GQPLQVVGAI TAYAAKMAEA VGFKAVYLSG GGVAANSLGI
PDLGISTMDD VLIDARRITD ATHLPLLVDI DTGWGGAFNI ARTVRSFIKA GVAAVHLEDQ
VGQKRCGHRP NKEVVATQEM VDRVKAAVDA RTDDQFVIMA RTDAAAAEGL DAAIERAVAY
VEAGADMIFP EAMRTLDDYR KFKAAVKVPI LANLTEFGTT PFFTTTELRD ANVDIALYCC
GAYRAMNAAA LNFYETTMRD GTQKAAVPTM QTREDLYKYL GYHAYEDKLD ALFAANK
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