Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6705 |
Symbol | |
ID | 6248239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 1309305 |
End bp | 1311275 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642598374 |
Product | Fis family proprionate catabolism activator |
Protein accession | YP_001862776 |
Protein GI | 186471458 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.344475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGA ATCCGACCCG GACCGCCGCG ATGAGCACAC CTTCCGCCGT TTCCAACCCG CGCCCGCGCA TCTGGGCGAT GGGCATCAGC CGCTTGCGCG ATCTGTTCGT CGATATCGCG AGCGAATACG CCGCCCGCGC CGATTTGCGT GTCGTCGCCC GCGGTTTCGA CGACGCCGTG CAGGAAATCG AGGCGGCGGG TTCCGAGCTG CCGGACGTGA TCGTCGCAGG CGGCTCGAAC GGCGCGTATC TAAAGACGCG TGTCAGCGTA CCCGTCGTGG TCATCGCGCC CACTGGCTTC GACGTGATGC AGGCGCTGGC ACGGGCGCGG CGCGACGGCA ATTCAGTCGC GCTCGTCACG CACGGCGACA CGCCCGACGA GGTGAAGCGT TTTGCGTCGG CATACGGCAT CGACGTGATC TTCGCGTCAT ACCGCTCGAC GGAAGACGCA GAGGATTGCG TGCGCGAACT GCGCGAGCGT GGCGTGGACG CCGTCGTCGG GCCGGGCCAC GTGACCGATC TCGCCGAGCG TGCGGGCATG GGCGCCGTCT TCCTGTATTC GCGCGCCTCG GTGCGCAGCG CCTTCGATAC GGCGCTCGAA GTGGCGCACG CCACGCGTGC CGAAGGCATG CGCCGTCAGC GCCTCGACAA CCTGTTGCAG CATTTGCGCG ACGGCGTCGT CGCGCTGGAC GCCCAAGGGC GCGTCGAAGC GATCAACCGG CGGCTGGCGG GCGTGCTCGG TATCGACGCC GCAAGCGCAG CCGGTTCGCC GTTGGAGCAG CTCGCGCCCG ATATCGCCGG CGCGCTGCCC GATAACGACG GCGACACGCT CGTGTCCGTG CGCGGCACGA GCTATCTCGT GCATCGCGGG CCGCTGGCGG GCGCTGATTC ATCGGCGGGT ACAGTGCTGA CCTTCCAGGA ATCGCGTGCG GTAGAACGGC TGGATCGCAC GCTGCGTTCG CGCCAGCGCG CGCAGCAGCT TACGGCCCGC TACCAGCTAG ACGATCTGGT CGGCGAGTGT CCATCGATCG AGCGTGTGCG CATGCTCGTG CGGCGGTATG CGAAGTCCGA TGCAACCGTC TTGATACTCG GCGAAAGCGG CACGGGCAAG GAAATGGTGG CGCAAAGCAT GCATCAGCTG AGCGCGCGGC GCGACTTTGC ATTCGTCGCG ATCAATTGCG GCGCATTTCC GGAGGCCCTG CTGGAAAGCG AGTTGTTCGG CTACGAGGAA GGCGCGTTCA CAGGTGCGCG CAAAGGCGGC AAGGCGGGAC TGATCGAAGC GGCCCATCGC GGCACGCTGT TTCTCGATGA GATCGGCGAG ATGCCGCTGC CGCTGCAGAG CCGGCTGCTG CGCGTGTTGC AGGAGCGAGA AGTGGTGCGG CTCGGATCGA CGGAGCCGAC GCGTGTCGAT ATCCGCGTGG TTGCCGCAAC GCACCGTGCG TTGACGGAAG GCATCGGGGA CGGCACGTTT CGCGCGGACC TCTACTATCG GCTGAACATT CTGAGCATTG CGCTGCCGCC GTTGCGCGAA CGCACGACCG ACGTGCTGCC GCTTGCCGCC CAACTGCTGC TGCAGGCGGC AGCGCGCGAA CCGAGGCTGG CCGCGCGCGT CGGCGATCTG CCCGCAGCGA CGCGCGTGCT CGCGCAGATC GGAGAGCCGT TACGCGGCTA CGCGTGGCCA GGCAATGTGC GCGAGTTGCA GAACGTGATC GAACGGATTG CCGTCGAGCT CGCCGATACG GAAGACGACA CGTTCACGCG CGAGATGCTC GATGTCGTCG CACCGGAACT ATTCGCATCG TCGAAGCCGC AAAAGAAGGG CACGTTGACG TTGCGCGAGC GCAGCCGGCA TGTCGAAGCC GACGAGATAC GCGCGATGCT GGCGGTGTGC GGCGGAGATC GCGATGCCGC GTGCCGAGCG CTCGGCATCA GCAAGACGAC GTTGTGGCGC AAGCTCAATG CGACGCAATG A
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Protein sequence | MTVNPTRTAA MSTPSAVSNP RPRIWAMGIS RLRDLFVDIA SEYAARADLR VVARGFDDAV QEIEAAGSEL PDVIVAGGSN GAYLKTRVSV PVVVIAPTGF DVMQALARAR RDGNSVALVT HGDTPDEVKR FASAYGIDVI FASYRSTEDA EDCVRELRER GVDAVVGPGH VTDLAERAGM GAVFLYSRAS VRSAFDTALE VAHATRAEGM RRQRLDNLLQ HLRDGVVALD AQGRVEAINR RLAGVLGIDA ASAAGSPLEQ LAPDIAGALP DNDGDTLVSV RGTSYLVHRG PLAGADSSAG TVLTFQESRA VERLDRTLRS RQRAQQLTAR YQLDDLVGEC PSIERVRMLV RRYAKSDATV LILGESGTGK EMVAQSMHQL SARRDFAFVA INCGAFPEAL LESELFGYEE GAFTGARKGG KAGLIEAAHR GTLFLDEIGE MPLPLQSRLL RVLQEREVVR LGSTEPTRVD IRVVAATHRA LTEGIGDGTF RADLYYRLNI LSIALPPLRE RTTDVLPLAA QLLLQAAARE PRLAARVGDL PAATRVLAQI GEPLRGYAWP GNVRELQNVI ERIAVELADT EDDTFTREML DVVAPELFAS SKPQKKGTLT LRERSRHVEA DEIRAMLAVC GGDRDAACRA LGISKTTLWR KLNATQ
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