| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6570 |
|---|
| Symbol | |
|---|
| ID | 6248107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1154081 |
|---|
| End bp | 1154998 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642598242 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001862644 |
|---|
| Protein GI | 186471326 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.720722 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATAAAT CGCCGAACCT TGACGACTTG CGTGTGTTCT GCACCGTCGC CCGCCAAGCC
AGCTTCAGCG CGGCGGCGGA GGCGCTGTCG GTGTCGGCGG CGTATGTGAG CAAGCGCGTG
GCCATGCTCG AAGCCGATCT CGGCACGCGG CTTTTTCACC GCTCCACGCG CCGCGTCGCG
ATCACGGACG CGGGCGAGCG CGTCTACGCG TGGGCCGAAA AGATTCTCGA CGACGTCGAC
CGTCTCGTTG AGGACGTGTC GACCACGCGA CGCGTGCCGC GGGGCATGTT GCGCGTATCG
AGCAGTTTCG GTTTCGGCCG GCATGTCGTG GCGCCCGCGC TGGCACGGCT CACGGAGCGC
TATCCGCAAC TGAGCGTGCG GCTCGATCTG TTCGATCGCA TCGTCGACGT CGCGGGCGAA
GGCTTCGACC TCGATATCCG CATCGGCGAC GAGATTGCTG CGCATCTGAT CGCGAAACGC
CTCGCGTCGA ATCATCGCGT GCTGTGCGCG GCGCCAGCTT ATCTGAAGCG GCACGGCACG
CCGCGTCAGC TGGCGGATCT CGGCGCGCAT CAATGCCTTG CGATCAAGGA GCGCGACCAT
CCGTCCGGCG TCTGGCGTCT GACGGAACGC GGCGAAACCG TGTCGGTGAA GGTAACCGGG
CCGCTGTCGA CCAACCACGG CGAAGTGGCC GTGCAATGGG CGCTGGCAGG GCGCGGCATC
GTGCTGCGTT CGATCTGGGA TGTGCGCGGG CTGCTGGACA GCGGCGCACT GGTGCAGGTG
CTGCCGGGCG TCACGCAGCC TGCGAACGTG TGGGCCGTGT ATCCGGCGCG GCTCGCTTCG
TCAGCGAAGG TGCGCGTGTG CGTCGACTTT CTGGCCGACG AGTTCGGCCG TCTGGCCGAA
CCCGGCGGGC CTCAGTGA
|
|---|
| Protein sequence | MNKSPNLDDL RVFCTVARQA SFSAAAEALS VSAAYVSKRV AMLEADLGTR LFHRSTRRVA
ITDAGERVYA WAEKILDDVD RLVEDVSTTR RVPRGMLRVS SSFGFGRHVV APALARLTER
YPQLSVRLDL FDRIVDVAGE GFDLDIRIGD EIAAHLIAKR LASNHRVLCA APAYLKRHGT
PRQLADLGAH QCLAIKERDH PSGVWRLTER GETVSVKVTG PLSTNHGEVA VQWALAGRGI
VLRSIWDVRG LLDSGALVQV LPGVTQPANV WAVYPARLAS SAKVRVCVDF LADEFGRLAE
PGGPQ
|
|---|
| |