Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6445 |
Symbol | |
ID | 6247984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 1024293 |
End bp | 1026656 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642598119 |
Product | ornithine decarboxylase |
Protein accession | YP_001862521 |
Protein GI | 186471203 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.621476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.414615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCCTC GATCCATCAA AGCGCCAACC ATTCCGATTG CCTTCCACAA GCTATTGAAG GTCGTCGCCA TCGTGGATGG CAACGACGCG CAGAGCGGCG AATTGCTGGC GGAGATCACC GCGGAGCATT ACCGTGTCGA AGTGACCGAC AGCTACACAC GCGATGTCAA CGAAGATGCC GATGTCGGCG CCTACATCAT CCTCATCGAC GGGGCACGCC TCGAGCCGGC GCGCAAGCTC GCCGCGGCCG TGCGGTCGCT CGGCTTCCGT ACGCCGCTCT GGGCGCTGGC CAACACACAC CGGCTGTCGG ATCTCGCAGT GACGGGCGGA CTCGGCGAAG TCGACGGCTA TATCTATCTG GGACAGCAAT CGCCCATTTT CTACGCGAAG CAGGTGATGG GGAGCCTCGT CAAATACGGC TTGAGTCTGC TGCCGCCCTT CTTCGGCGGA CTCGTCGCGT ACGACGCGGA AGCGAACATC GCATTCGATT GCCCCGGTCA TCAGGGCGGG CAGTTTTATC GGAAGTCGCC CGCCGGCCAG CTGTTCTTCA AGCACTTCGG CGAAAGCATT TTCAGAAACG ACCTCTGCAA TGCCGATGTC GATCTCGGCG ACCTGCTGAT TCACGAAGGC GCCGCGGCCG ACGCCCAGCG CCACGCCGCC GAGGTATTCG GCGCTGACCA GACCTATTTC GTGCTCAACG GAACCAGCAC GTCCAACAAA ATCGTGACAG GCGCGGTGCT CAAACGCGGC GACCTCGTGC TCTTCGACCG CAACAATCAC AAATCGCTGC ATCAGGGCGC GCTGGTGCAG GCAGGCGCCA TTCCCATCTT CCTGCCGACA TCGCGCAACG CGTTCGGCAT GATCGGCGCC GTCGACTGGG AGGCATGGAG CGAAGATTAT CTGCGCGAGC AGATCCGCAA CAGCCCGCTC GTCGAAGATC GCGAACGCGC CGGCGCCGCA CGTCCGTTCC GGCTCGCCTG CATTCAGCTC GCGACCTACG ACGGAACGAT CTACAACGTC CGCAAAGTGC TGGAACGGAT CGGCCACCTG TGCGACTACG TGCTGTGGGA TGAAGCGTGG ATTGGTTACA ACGCGTTCCA TCCGCTGTTC AACGATCACA GCCCGATGCG GCTGAAGGAC CTGACGCCCG ACATGCCTGG CCTGTTCTCC ACCCAGTCCG TTCATAAGCA GGGTGCCGGT TTTTCGCAGG CGTCCCAGGT TCATAAGCGA GACGAGCATA TTCGCGGACA GAAGCGCTAT ATCGAACACA AACGTTTCAA CGAATCGTTC CTGATCCACG CAAGCACCTC GCCCTTCTAT CCGCTGTTCG CATCGCTCGA CGTCAACGCC AAAGTCCACG AAGGCAAAGC GGGAGAAATG CTCTGGGACA GCTGCATCGA ACTCGGCATC GAGGCGCGCA AGAAGTTTCG CCAGTTCGCG CGCCACTATG AGGTGACGGG CAGGAACGCG CAGGAACAAT GGTTCTTCGA TCCTTTCGTG CCGGACGTCG TCGATATCCG CAATTCGAAT TTCATGGCCG ATGCGTCGAA TGTCATGTGG GAAGACATTC CGACGGATGT CATCAAGCAC GAGCAGCAAT GCTGGGAGTT CCGTCCGGAA GCGGCGTGGC ACGGCTACAC GGGTTACGCC GACGGCTATG TGATGGCGGA CCCGAACAAG CTGAATCTGC TGACACCGGG CATCGACCGG AAGACGGGCG AATATCTCGA CTTCGGCGTG CCAGCGACGG TGGTGGCGAA TTATCTGCGC GAGGAAGGGA TCGTCCCCGA GAAGTGCGAC CTGAACAGCC TGCTCTTCCT GATGACGCCC GCCGAAGACG AAAGCAAGCT GAACACGCTG ATCGCACGCT TCGTCAAGTT CAAGAACCTG TGGGACCGCG ATGCCGCGCT GGCGGAAGTC CTGCCTTCGT TGTGCGCGGC GCACGGAAGT CGTTACCAGG GCTACACGCT GCGCCAGGTG TGCAACGAGA TGCACACGTT CTATCGAGAG GCCAACGTGA AGAACCTGCA GAGACTGTGC TTCCGCGCGT CGAGCTTCCC GGAACTGGCG ATGTCGCCGA AAGAAGCCTA TGAAGCGCTC GTCGCAAACC GCGTCGACTA CGTGCCGCTC GATCAGGCAA AGAACCGCAT TTCCGCCACG CTGGCGCTGA TCTATCCGCC AGGCATCGGC GTCGTGCTGC CCGGCGAACG TTGGGATGAC CGTGCCCAAC CGATGCTGGA TTACTTCATG GCGTTTCAGG AATCGTTCAA TCGCTTCCCC GGCTTCAATT ACGAAGTCCA GGGCGTGTTC CAGGAACGCG AAGACGGTCG CATCCGTTTC TATACGTACG TGGTCAGTGA ATAA
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Protein sequence | MVPRSIKAPT IPIAFHKLLK VVAIVDGNDA QSGELLAEIT AEHYRVEVTD SYTRDVNEDA DVGAYIILID GARLEPARKL AAAVRSLGFR TPLWALANTH RLSDLAVTGG LGEVDGYIYL GQQSPIFYAK QVMGSLVKYG LSLLPPFFGG LVAYDAEANI AFDCPGHQGG QFYRKSPAGQ LFFKHFGESI FRNDLCNADV DLGDLLIHEG AAADAQRHAA EVFGADQTYF VLNGTSTSNK IVTGAVLKRG DLVLFDRNNH KSLHQGALVQ AGAIPIFLPT SRNAFGMIGA VDWEAWSEDY LREQIRNSPL VEDRERAGAA RPFRLACIQL ATYDGTIYNV RKVLERIGHL CDYVLWDEAW IGYNAFHPLF NDHSPMRLKD LTPDMPGLFS TQSVHKQGAG FSQASQVHKR DEHIRGQKRY IEHKRFNESF LIHASTSPFY PLFASLDVNA KVHEGKAGEM LWDSCIELGI EARKKFRQFA RHYEVTGRNA QEQWFFDPFV PDVVDIRNSN FMADASNVMW EDIPTDVIKH EQQCWEFRPE AAWHGYTGYA DGYVMADPNK LNLLTPGIDR KTGEYLDFGV PATVVANYLR EEGIVPEKCD LNSLLFLMTP AEDESKLNTL IARFVKFKNL WDRDAALAEV LPSLCAAHGS RYQGYTLRQV CNEMHTFYRE ANVKNLQRLC FRASSFPELA MSPKEAYEAL VANRVDYVPL DQAKNRISAT LALIYPPGIG VVLPGERWDD RAQPMLDYFM AFQESFNRFP GFNYEVQGVF QEREDGRIRF YTYVVSE
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