| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6374 |
|---|
| Symbol | |
|---|
| ID | 6247914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 950975 |
|---|
| End bp | 951658 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642598049 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001862451 |
|---|
| Protein GI | 186471133 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
|---|
| TIGRFAM ID | [TIGR02798] 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0543151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAAC TCGGAGTGGT GTATCGCAAC ATCAAGCGTG CGGCTGGCGA CGTCGCGACG
CAACTCGGCG CGCTCGGCAG CGCGACGGTG CACGAAGCAA TGGGACGCGT CGGTCTGCTG
AAGCCGTACA TGCGGCCCAT CTACGAAGGC GCCCAGGTGG GCGGCACGGC GGTGACGGTG
CTGCTGCAAC CGGGCGACAA CTGGATGCTG CACGTCGCGG CCGAGCAGAT CCAGCCAGGC
GACGTCGTCG TCGCCGCCTG CACGACCGAC AACACGGACG GCTTCTTCGG CGATCTGCTG
GCGACGAGCT TCAAGGCGCG CGGCGCACGG GCACTGATCA TCGACGGCGG CGTGCGCGAC
GTGCGCGTGC TCACGCAGAT GCAGTTTCCC GTGTGGAGCA AGGCAATTTC GTCGAAGGGC
ACAGTGAAGG CGACGCTCGG CTCAGTGAAC ATTCCCGTGG TGTGCGCGGG CGGCCTGGTT
CATCCGGGCG ATGTGGTCGT GGCCGATGAC GACGGCGTGG TCGCGGTGCC CGCTGCATTG
GCGGCACAGG TGCTGGAAAA GGCGTTGGCG CGCGAATCCT TCGAAGCCGG GAAGCGCGCG
AAGCTCGCGT CGGGTGTGCT CGGCCTCGAC ATGTACAACA TGCGTGGCCC GCTCGAAAAG
GCGGGACTGC GCTATATCGA CTGA
|
|---|
| Protein sequence | MYELGVVYRN IKRAAGDVAT QLGALGSATV HEAMGRVGLL KPYMRPIYEG AQVGGTAVTV
LLQPGDNWML HVAAEQIQPG DVVVAACTTD NTDGFFGDLL ATSFKARGAR ALIIDGGVRD
VRVLTQMQFP VWSKAISSKG TVKATLGSVN IPVVCAGGLV HPGDVVVADD DGVVAVPAAL
AAQVLEKALA RESFEAGKRA KLASGVLGLD MYNMRGPLEK AGLRYID
|
|---|
| |