| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6279 |
|---|
| Symbol | |
|---|
| ID | 6248793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 843499 |
|---|
| End bp | 844515 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642597957 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001862359 |
|---|
| Protein GI | 186471041 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.147886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.656807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTTTG GAATCGTCCT GTTGCCGAAT TTCACGCTGA CTGCGTTTTC CGGCTTCGTG
GATCTCTTGC GTCTCGCGAG CGACGAGGGC GATTTCAGCA AGCCGGTCCG GTGCGCGTGG
ACGGTAGTCG GCGAATCGCT TACGCCCGTG AGAGCGAGTT GCGGCATTCA GATCCAGCCG
TGGCAAACCT TCGACGATGC CGGCAGCTTC GATTACGTCG TCGTGATCGG CGGTCTGCTC
CATTCGGGAC CGGGCGCGAG CGATGCGACG CTTCGCTTCG TTCGTCATGC CGCTGCGACT
GCATCGACAC TCGTGGGCAT CTGCACGGGC GTGTTCGCGC TCTCACGCGC GGGCGTCATG
GACGGCTATC GCGTGTGCGT CAGCTGGTTC CACTACTGGG ACTACGTTGC GCGCTTTCCC
GGCGTCGACG AAACGTTGCT CGTCGCCGAC CGGCTTTTTG TGATCGATCG CCGCCGCATT
TCGTGTTCGG GCGGCCGGGC GTCGATCGAT GTGGCCGCCG CGATTTTGCA AAGACATATC
GACGCTGCGA CCGTGCAAAA GGCGCTGCGC ATCCTGCTCG TCGAGGACGC GCAGCGGGCG
AGCGCGCCTC AACCGCATCC GCCCGGCACC AAGCCCGTCA CACATCCGCG CGTGAAGCGC
GCGGTCCATC TGATGGAACA GCACATCGGG CGGCCGTTGA ACCTCGAGGA ACTGGCCGAA
CGCGTCGATA TGTCGGTGCG CCATTTGCAG CGGCTGTTCA AGACGCAAAC GGGCGAGTCG
CCGCTCGCAT ACGCGCGGCG CATGCGGATC AGGACGGCTG CGTGGCTGCT GACGGACTCG
GATCGAACGG TGGCGGAGAT CGCCGCGATT TGCGGTTTCG CCGACGCATC GCATTTGGGC
CGCGAGTTTC GCAAGGAGTT CGGCCTCTCG CCAAATGCCT ATCGCGCCGA TCGGGTTCGC
GCGGATGCCG GGAGCGGGCA GGAGCCGCGG CCGGGATTCG CGAGGTCGTT GACTTGA
|
|---|
| Protein sequence | MTFGIVLLPN FTLTAFSGFV DLLRLASDEG DFSKPVRCAW TVVGESLTPV RASCGIQIQP
WQTFDDAGSF DYVVVIGGLL HSGPGASDAT LRFVRHAAAT ASTLVGICTG VFALSRAGVM
DGYRVCVSWF HYWDYVARFP GVDETLLVAD RLFVIDRRRI SCSGGRASID VAAAILQRHI
DAATVQKALR ILLVEDAQRA SAPQPHPPGT KPVTHPRVKR AVHLMEQHIG RPLNLEELAE
RVDMSVRHLQ RLFKTQTGES PLAYARRMRI RTAAWLLTDS DRTVAEIAAI CGFADASHLG
REFRKEFGLS PNAYRADRVR ADAGSGQEPR PGFARSLT
|
|---|
| |