| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6247 |
|---|
| Symbol | |
|---|
| ID | 6247798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 809180 |
|---|
| End bp | 810121 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642597933 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001862335 |
|---|
| Protein GI | 186471017 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.887249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGA CCCAATCCGA CGACATCAGT CTCGCATTGC CGCGCAGAGT CCTCATTGCC
GTCGATTCGT CGACAGCATC GCGAAACGCG CTTGCGTACG CTAGCAGCAT CCTCCCCCAC
GGTGGTGAAG TCCGGCTCGT GAGCGTTGCT GAAAATCCGC ATACCCTCTT TCCGACCGGT
CGCCATGTCA GACACGCGCT GGATTCAGTC CGCGACAGAT TACTTGAGGA TGCGGCGGGA
GCGCTCGAAC AGGCCAAAGC GTTTCTGGCG CCACGCGACG TACGCATCGA GACGGAAGTG
GTCGACCTTT CGAAGCGCGG CGGGGTCGTT GTGCAGACGT TGGTGAATGC TGCCAATGCA
TGGCAAGCCG AACTGCTGGT CGTCGGTGCG CACCACCATC ATGGGTTGGC GCGTTGGGTA
GAGGGAACCG TCTCCGAGGG GTTGACAAAG CTTCTGCACT GCCCCCTGCT TGTCGTACCG
GAAGGCTATA GCGTCGAGAA CGGACATTTG CCGGAGAAGA TCCTGTTCGC GGTTGACGGA
AGCCCTCACG CGGCAAACGC GTTGCGCTTT GGCGTGCGGT TTGCGGCACC CGACGCTTCC
TTGCGAGCCA TCTACGTGAT TGATCGCGCG GTACGGCTCA GCGACTTCGT TCCCATCGAT
GCACTGGAAG ACGCTTTCCT TGATGAAGGC AAACACGCCC TGGCGGCAGC GGAGCCGGTT
CTTTCGCGTG TGTCGACAAG GTCGAGTACC GCACTCGTCA AGACTCGTCG CACCAGCGAC
GACGTTGCCC ATACCATCGT TCGCGAAGCC AGCAACTGTC ACGCGCAACT GATTGTGATG
GGAACGCATG GCAGGAGGGG TATATCACGT TGGCTGTTTG GTAGCGTTGC GGGGCGGGTC
GCGCAACTTG CGCAAACCCC GCTACTACTC GTCGGCACAT AG
|
|---|
| Protein sequence | MNPTQSDDIS LALPRRVLIA VDSSTASRNA LAYASSILPH GGEVRLVSVA ENPHTLFPTG
RHVRHALDSV RDRLLEDAAG ALEQAKAFLA PRDVRIETEV VDLSKRGGVV VQTLVNAANA
WQAELLVVGA HHHHGLARWV EGTVSEGLTK LLHCPLLVVP EGYSVENGHL PEKILFAVDG
SPHAANALRF GVRFAAPDAS LRAIYVIDRA VRLSDFVPID ALEDAFLDEG KHALAAAEPV
LSRVSTRSST ALVKTRRTSD DVAHTIVREA SNCHAQLIVM GTHGRRGISR WLFGSVAGRV
AQLAQTPLLL VGT
|
|---|
| |