| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6223 |
|---|
| Symbol | |
|---|
| ID | 6247777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 787063 |
|---|
| End bp | 788508 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642597912 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001862314 |
|---|
| Protein GI | 186470996 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACG CAGACAATGG CAGTCAGCTG AAGTGCAGTC TGAAGCAAAG GCACATGACG
ATGATCGCGC TGGGCGGTGT GATCGGGGCA GGGCTCTTTG TCGGAAGCGG CGTGGTAATC
CAGCAGGCAG GACCCGCCGC GATTTTGTCG TTTCTGCTGA CGGGCGGCCT CGTCGTGCTC
GTGATGCGAA TGCTCGGCGA AATGGCTTCC GCGATGCCCG CCGTCGGATC GTTCTATGAA
TACGCACGCC TCGCGTTCGG CGAAAGCAGA CCAGCGGGCG AACTGGCGGG CTTTCTGACA
GGCTGGATGT ACTGGTACTT CTGGGTGATC GTCGTGGCCG TCGAAACCGT GGCGGGCGCG
CATCTCGTGC AGTTCTGGCT GCCAGGGGTG CCAGCATGGG CGATCGGGCT CGGGCTTCTG
CTCGTGCTGA CGCTGACCAA TCTGATCTCC GTCGGCAGCT ATGGCGAGTT CGAGTTCTGG
TTTGCGTCGG TGAAGGTGGC GGCCATCATC GTGTTCCTGT TCGTCGGCAC GCTGTTCGTG
CTCGGCATGT GGCCGCATGC GAATCACGCG GCACTGCCGA TTGCGCAGAT CGCCGCGCAT
GGCGGCTTCA TGCCGAAGGG CATCGGGCCC GTGCTGAGCG GCGCCGTCGC GGCAACCGGC
TTTTACTTCG GCGCGGAGAT CGTCACGATT GCAGCCGCCG AAGCCCGCGA GCCGGAACGC
GCCGTCGCGA AAGCGACGAA CTCTGTGATC GCGCGCGTGC TGGTGTTCTA TGCCGGCTCG
ATCCTGCTCG TCGTCGCGAT CGTGCCGTGG AATTCGCCGG GCATGTCGAC GCCGTACGTG
AGCGCACTCG AAGCGATGCA CATTCCCGCC GCCGCGCATC TGATGAACGC AATCATCCTG
ACGGCGGTGC TGTCCGCGCT GAACTCGGGC CTTTACGCCG CCTCGCGGAT GATGTTCGCG
CTGACACGGC GCGGCGATGC GCCGCGCTCG CTCGCGAAGG TCAACAGCCG CGGCGTGCCG
GTGCGCGCGA TTCTGATGGG TACGTTGTTC GGTTACGTGT CGGTGGTGAT GTCGTATGTT
TCACCGGATA CGGTGTTCGC GTTTCTCGTC AACTCGTACG GCACCGTCGC GATATTCGTC
TACGTGCTGA TCGCGCTGTC GCAACTAAAG CTGCGCGCGC GGCTGGAACG CGAAGCGCCC
GGCAAGCTGC GTGTCAAGAT GTGGTGTTAT CCGTATCTGA CGTGGTTCGC GATCATCGGC
ATGGGCGCGA TCATCGTGGC GATGGCGTTC ATTCCGGATC AGCGCAAGCC GCTGTGGTTT
GGTGTCGTCA GCCTCGCGGT GCTGATTGCT GTGTACTGGC AGCGCGGCCG CTGGCGCAAG
GGTGCGTCCA GCACGCAGCA TTCGATCGAC ACTGAGCGGA TGCATGTTTC CGGGCGGCGG
TATTAG
|
|---|
| Protein sequence | MQHADNGSQL KCSLKQRHMT MIALGGVIGA GLFVGSGVVI QQAGPAAILS FLLTGGLVVL
VMRMLGEMAS AMPAVGSFYE YARLAFGESR PAGELAGFLT GWMYWYFWVI VVAVETVAGA
HLVQFWLPGV PAWAIGLGLL LVLTLTNLIS VGSYGEFEFW FASVKVAAII VFLFVGTLFV
LGMWPHANHA ALPIAQIAAH GGFMPKGIGP VLSGAVAATG FYFGAEIVTI AAAEAREPER
AVAKATNSVI ARVLVFYAGS ILLVVAIVPW NSPGMSTPYV SALEAMHIPA AAHLMNAIIL
TAVLSALNSG LYAASRMMFA LTRRGDAPRS LAKVNSRGVP VRAILMGTLF GYVSVVMSYV
SPDTVFAFLV NSYGTVAIFV YVLIALSQLK LRARLEREAP GKLRVKMWCY PYLTWFAIIG
MGAIIVAMAF IPDQRKPLWF GVVSLAVLIA VYWQRGRWRK GASSTQHSID TERMHVSGRR
Y
|
|---|
| |