Gene Bphy_6105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6105 
Symbol 
ID6247670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp651189 
End bp652586 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content65% 
IMG OID642597806 
Productmajor facilitator transporter 
Protein accessionYP_001862208 
Protein GI186470890 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.84268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCT CGCAGGCGGC CAAACGGTCC GCTCAACGAA CGGCTGCGCG CGCCGCACGA 
GCGCTCGACG TTCAACAATT CCTCGACGAT CAGCCGATCG GACGCTTCCA GCTTCTCGTG
CTGCTGATGT GCATGCTGAT CGTGATGCTC GACGGACTCG ATACGGTGAT GATCGGCTTC
ATCGCGCCGT CGCTTTCCAC TGCATGGGCG ATACCGCGCG ATGCGCTCGG TCCCGTGATG
AGCGGTGGCC TGCTCGGTCT TGCGTTCGGT GCGCTCGGCG CGGGGCCGAT GTCGGATCGC
TTCGGCCGCA AGGCCGTGAT GACGACGGCC GTGCTTTTCT TTGGCGTGTG GAGTCTCGCA
TCGGCATTTG CGACGGATGT CGCCTCGTTG ACGGTGCTGC GCTTTCTGAC GGGCATCGGC
CTCGGCGCGT CGATGCCGAA TGCCGCGACG CTGATGGCCG AATATGCACC GCCGCATCGG
CGCTCGTTGA TGGTGACAAT CGTTTTCTGT GGCTTCACGT TCGGCGCGGC GGGCGGCGGC
TTTGTCAGCG CGTGGCTGAT TAGCGCGTAC GGATGGCATT CGGTGCTGCT GCTCGGCGGC
GTGCTGCCCA TTCTGTATGT GCCCGTGCTG ATCAAATGGC TGCCGGAGTC GGCGCGCTAT
CTGGCGTTGA AGCAGAGCCG CCGCATGCGT CTCGTCGATG TGCTCAATCG GCTGAAGCCC
GCCAGCGCCG ACGCCACCAC GCGCTTCATC TCGCACGAAC CGGAACGCGC GGAACGCAGC
CCCGTGCGCG CGATTCTTTC GCGCGACCAT GCGTTCGGCA CTGTGATGCT GTGGATCTGC
TACTTCGCCG GTTTGCTCAC TGTGTATCTG CTCGGCAACT GGCTGCCGAC GCTGATTCGA
GGAATCGGCT TCACGCTCGC CGAAGCGGCG GTGGTCGGCG CTCTGTTCCA GGCGGGCGGC
ACGATCGGCT CGGTGCTGAT CGGCTGGCAG ATGGACCGCT TCAATCCGCA TCGCGCGCTG
GGGTTGACCG TGTTCGCCGG TGGCGTGCTG GCCTGGTACA TGGGGTCGTC GGCGCACACG
TTCAGCACGA TCTGCGTGCT CGCGTTCGGC ATGGGTTATT GCATGAACGG TTCGAATACG
GGCTTTTGCG CGCTCGCGGC GGGTTCCTAC CCGACGTCCA TGCGCGCGAC GGGCACGAGC
TGGATGCTGG GCGTCGGCCG ATTTGGCGGG ATTGCGGGCG CGATGCTCGG CGCGTCGATG
CTGCACGCGA ACTGGGGTTT CGGCGAAGTG TTCATGGCGT TGGCGGTGCC TGCCGCGGTC
GGCGCATTGG GCGTATTGCT GAAGGGCGCG CGGCACAAAG GCCCAATTGC GCAGGTCAGT
GTGAGCGCGG GGCACTGA
 
Protein sequence
MTFSQAAKRS AQRTAARAAR ALDVQQFLDD QPIGRFQLLV LLMCMLIVML DGLDTVMIGF 
IAPSLSTAWA IPRDALGPVM SGGLLGLAFG ALGAGPMSDR FGRKAVMTTA VLFFGVWSLA
SAFATDVASL TVLRFLTGIG LGASMPNAAT LMAEYAPPHR RSLMVTIVFC GFTFGAAGGG
FVSAWLISAY GWHSVLLLGG VLPILYVPVL IKWLPESARY LALKQSRRMR LVDVLNRLKP
ASADATTRFI SHEPERAERS PVRAILSRDH AFGTVMLWIC YFAGLLTVYL LGNWLPTLIR
GIGFTLAEAA VVGALFQAGG TIGSVLIGWQ MDRFNPHRAL GLTVFAGGVL AWYMGSSAHT
FSTICVLAFG MGYCMNGSNT GFCALAAGSY PTSMRATGTS WMLGVGRFGG IAGAMLGASM
LHANWGFGEV FMALAVPAAV GALGVLLKGA RHKGPIAQVS VSAGH