Gene Bphy_6039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6039 
Symbol 
ID6247609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp581788 
End bp582975 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content63% 
IMG OID642597745 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001862147 
Protein GI186470829 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.292434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00935557 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAAACC CTCCCTACAT TTCGTTTTCG GGCGTGAGCA AATCGTATGA CGGCGCGCAC 
TTCGTCGTCG ACGATCTGAA CCTCGACGTA CGCAAGGGCG AATTCCTGTC GCTGCTCGGG
CCGTCGGGTT CAGGCAAGAC GACCACGCTC ATGATGCTCG CAGGCTTCGA GGGGCCGACG
CAAGGCGAGA TTCGACTCGA CGGACGCCGG CTCGACGACA AGCCGCCGCA TCTGCGCGAC
ATCGGCATGG TGTTCCAGAA CTATGCCCTC TTCCCGCATA TGACGATTGC GGAGAACGTC
GCATTTCCGC TTTCGGTGCG TCATGTGAGC CGCGCCGAAC AGAAATCGCG CGTGCAACGC
GCACTCGATA TGATCGAGTT GCCTCATCTC GCGAATCGCC GTCCCGCACA ACTTTCCGGC
GGACAGCAGC AGCGGGTTGC GCTCGCGCGA GCGCTCGTCT TCGAGCCGAG CGTCGTGCTG
ATGGATGAGC CGCTCGGCGC ACTCGACAAA CGCCTGCGCG AAACGATGCA ATACGAAATC
ATGCGGCTGC ATCGCGAACT CTCGCTGACG ATCGTCTACG TGACGCACGA TCAGGCGGAA
GCGCTGACCA TGTCAGACCG TGTCGCGGTG TTCTCCGATG GCCGCATCCA GCAGGCGGCG
ACACCGAGCG AGCTATATGA GAATGCGCAG AACGCGTTCG TCGCGAACTT CGTCGGCGAG
AACAATGGGC TGACGGGGCG CGTCGTCGAC GTGAGCGACG ATCGCGCCAC CCTCGCGCTT
GCGGACGGCA GCATCATTCG CGGCCGTTGC GAAAGCGGTC TGCGCGAAGG CGATGAAGCG
ATGCTCGCGT TGCGCCCCGA ACGCGCGCAT ATTCCCAGCG CCGAAGGCAC GCACGCCGAC
GGTCACAGCA ACGTGGTGCG CGCCCGTGTC GAAGAGCTGG TGTATTGCGG CGATCATCAT
CGCGTCCATC TGAAGCTCGG CTCGCGCGAC GCCATCGTGG TGAAGGTTCC CAATACGCAG
CGCCACGCGC TGCCCTCTCC TGGCGATACG GTCGAAGTCG CGTGGCGCCA CGACGATTGC
AAGATTCTCG CAATGACAGC CAGCGCGCTG CGCAGCGCGC CCGCGAACTA TTCCTCGACG
TATCCCATAC CTTCCATCAT GACGACCGCA CCCGCAGGAG CCAACTGA
 
Protein sequence
MSNPPYISFS GVSKSYDGAH FVVDDLNLDV RKGEFLSLLG PSGSGKTTTL MMLAGFEGPT 
QGEIRLDGRR LDDKPPHLRD IGMVFQNYAL FPHMTIAENV AFPLSVRHVS RAEQKSRVQR
ALDMIELPHL ANRRPAQLSG GQQQRVALAR ALVFEPSVVL MDEPLGALDK RLRETMQYEI
MRLHRELSLT IVYVTHDQAE ALTMSDRVAV FSDGRIQQAA TPSELYENAQ NAFVANFVGE
NNGLTGRVVD VSDDRATLAL ADGSIIRGRC ESGLREGDEA MLALRPERAH IPSAEGTHAD
GHSNVVRARV EELVYCGDHH RVHLKLGSRD AIVVKVPNTQ RHALPSPGDT VEVAWRHDDC
KILAMTASAL RSAPANYSST YPIPSIMTTA PAGAN