| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6020 |
|---|
| Symbol | |
|---|
| ID | 6247590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 562954 |
|---|
| End bp | 563904 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642597726 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_001862128 |
|---|
| Protein GI | 186470810 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.217101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.377898 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG CAATTCTGGG GGCCGGTGCG CTGGGCTGCG CTATCGGTTC CACACTGACT
CAAGGTGGCC ACGAGACCTG GTTGATCGAC CGGTCGGCTG CACATGTCGA GGCGATGCGC
CGCGACGGCC TGCTGGTCGA CGATGCCGAC GGTTCCCACC GCGTCGCCGT CCGCGCGGCG
ACGCACGCCG CTGAAGTCGG GGCGGTGGAT CTGGTTATTG TGCTGGTCAA GTCGTTTCAC
ACGGATTCGG CGATGCGCGG CGCACTCGAT CTCCTCGGAC CCGGCACCCT CGTGCTGTCG
TTGCAGAACG GCCTCGGCCA CGAAGACGTG CTAAGCGACA TCGTGGGCCG TGAGCGTGTG
CTCGCCGGCA AGACCTATGT CGGCGGGGTG CTGCGGGCGC CGGGCCATAT CCAGCGCGGT
GTGGCGGGGA AGTTCACCTA CATCGGCGAG CTGGATGGCC AGCTCACCGA CCGGGTGCAG
GCAATCGCCG GCGCATTCAA TGCGGCGGGC CTCGCGACCA CGGTTAGCGA CAACATAGTC
GGCACGATGT GGGACAAGTT GCTGATCAAT GTCGCGACGG GCGCGCTGAC GGGCATCACG
CGTCTCACGT ATGGGCAACT GTACGAAGAA CCCGTTCTCA AGGCGACCGC GCTGGCAGCC
GTGGCCGAGG CGATGGCGGC TGCCGAGGCA GCCGGCGTCA GTCTGTCGAT GACCGATGCG
GAACAGGCCT GGACACTCGC ATCCGAAGGA CTCTCGCCCG CATTCAAGAC GTCGATGCTG
CAGAGCCTGG AGAAAGGGTC TGTCACGGAG ATTGACTTCA TCAACGGGGC GGTCGTGCGC
TGGGGTGAAC GGCTGGGTGT TCCGACGCCC GTCAACGCGA CACTCGTCGC ATGCATCAAG
GGCATCGAGC GGGCGATGGC TGACCGGCAA CGCGAAGGAG CGACGGCATG A
|
|---|
| Protein sequence | MKIAILGAGA LGCAIGSTLT QGGHETWLID RSAAHVEAMR RDGLLVDDAD GSHRVAVRAA
THAAEVGAVD LVIVLVKSFH TDSAMRGALD LLGPGTLVLS LQNGLGHEDV LSDIVGRERV
LAGKTYVGGV LRAPGHIQRG VAGKFTYIGE LDGQLTDRVQ AIAGAFNAAG LATTVSDNIV
GTMWDKLLIN VATGALTGIT RLTYGQLYEE PVLKATALAA VAEAMAAAEA AGVSLSMTDA
EQAWTLASEG LSPAFKTSML QSLEKGSVTE IDFINGAVVR WGERLGVPTP VNATLVACIK
GIERAMADRQ REGATA
|
|---|
| |