| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5968 |
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| Symbol | |
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| ID | 6247540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 497781 |
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| End bp | 499649 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597676 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001862078 |
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| Protein GI | 186470760 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.155545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTTT ATCTGTTCGC CACGGTGTTG CTGGCTGCAG TGGCTGCATT GGTGATTCCC
AGACTCGGAT ACAGCCCTGA CAACAATGAT CTATTGTATG TCTCGATCGG GCTGGCAGGG
TGCCTTGCGG CGTTTCTGCT CAGCATGGCG TACGGTGCGC GCCGCACGGC GCCGCGCGTC
GTGCGCACGA CCGAGTCGCC AGAGCTTGGC GCATTCGCCG CCAATCTTTC CACGCCCGCC
GTGCTGCTCG ACAACGACGC TCTGGTGTTC GTCAACAGCG CGTTTCTCAA GCACGCGCGT
TGGGAGTCCT ACGCGGATGA AATCGTCGGA ATGCCCTTCA GCAATCTCGT CCATCCGCAG
TCGTTGCTTG ATTTGACGGC GTTGCTCACG CAGTCGCGCG ACGGCGAAGA GCGCACCTCG
GGCTCGCTGC GCATTGCCTA TGGCGACGGC AGTTTTCGTC TGCACCCCGT CACGGCGTTG
CGCGCGCGCG GCTCGCGCAT GACGCTGCTG CAATTCCCCG CGCCGCATAC GAGCGCCGAT
GCGCAGCGCA GCGAGCTTCA ATTGCTGCAG CACTGCAAGG ATGCTGTGTT GCAGCTACCC
CAGCCGCTGT TCCGCGTCGA CCGGGAGTTA CGTCTGATCT TTTCTAATCC GGCATGGCGC
AGCCTGATGC GCGCGGTCGG CAGCGACGCG GAGCTCAAGC CGTTCTCTTC GTTCTTTCAT
CCCGAAGACG CCGAGACGCT GAATGCGCGC GTGAAGGCGC TGCTCGACGG ATCCCTGAGC
GAACTGGTCA CGGAAGCGCG CCTCATTCGC GCCGACAACA CCACGGCTCA CGTCGAATTG
CGCCTGCACG CCGTCACTGA CGACGAAGGC GTGCTGGACG GCGCCGTCGG CCTCGCGACG
GACATCTCCA ATCGCCGCCG CAACGAAGAG GCACTGCGTG CGAGCCGGCG CAGTCTGCGC
ACGCTGCTGT CCAACCTGCG GGCGATGATC TATCGCGGGC AGAACAATCG CGACTGGTCG
ATGGAATTCG TCAGTGAAGG GTGCTTCGAT CTGACGGGCT ACGAAGCGTT CGAACTGATC
GACGAAAGCC GCCTGGCGTT CCGCTCGCTG ATTCATCCCG ACGACCGCGA GTTCGTCTGG
AACGAAGTGC AGGCGCGCGT CGTCGCCCGC GAGCCGTATG AACTGACCTA TCGGATCGTG
GACCGCTCGG GACAGACCAA GTGGGTATGG GATCAGGGTT GCGGCGTCTA TTCGGCGCGC
GACGAACTGA TGGGACTCGA AGGGTTCATC GTTGAAGTGG CGCGCAGGCA GATGGTCGAG
GAAAACGCGC GTCGCCGGTT GACGTTCGAG CATTCGACAG GACTCGCGAG CGCGTCGATG
TTCGTCGGCC GGATGGAGTT CGCGGCGGCC ATCTCGGCGC GAACGGCGCT GCCGTGCGCG
ATCTTCGCGA TCAACGTCGG CGAACTCGAG CACGTCGCGG CGCGCTTCGG GCAGGACTAC
GCCGATCGCG TGATGATCGA CCTGGGCAGG CGGCTCGAAG CGACGCAAGG GCAGCTCAAT
TGCGCGGCCC TGCTGGACCC GCATGTGTTC GTGGTGATGG TGGTCGATTT CAGCACTGAC
GCGCTCGCGT GGTGCGGCGA CGCGCAAGCG CTTGCGCAAC GCGCGGCGGC GAATCCGGAT
GCCGTGCTCG ACGAGCTTCA GGACGAGTTG CGCGGGCTGC TCGAAGCGCC CGTTCGTATC
GAAGGCCATG AATTCAGCGT GCCGACTCGC ATCGGCTGTG CGTCGATCGG GCATGGCAAG
GGCGATCCGA AGAACGTGCT TGACCACGTG CTGGCGGCAT CCGGTTGGGA AGCAACGGGC
GAAGCCTGA
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| Protein sequence | MSVYLFATVL LAAVAALVIP RLGYSPDNND LLYVSIGLAG CLAAFLLSMA YGARRTAPRV
VRTTESPELG AFAANLSTPA VLLDNDALVF VNSAFLKHAR WESYADEIVG MPFSNLVHPQ
SLLDLTALLT QSRDGEERTS GSLRIAYGDG SFRLHPVTAL RARGSRMTLL QFPAPHTSAD
AQRSELQLLQ HCKDAVLQLP QPLFRVDREL RLIFSNPAWR SLMRAVGSDA ELKPFSSFFH
PEDAETLNAR VKALLDGSLS ELVTEARLIR ADNTTAHVEL RLHAVTDDEG VLDGAVGLAT
DISNRRRNEE ALRASRRSLR TLLSNLRAMI YRGQNNRDWS MEFVSEGCFD LTGYEAFELI
DESRLAFRSL IHPDDREFVW NEVQARVVAR EPYELTYRIV DRSGQTKWVW DQGCGVYSAR
DELMGLEGFI VEVARRQMVE ENARRRLTFE HSTGLASASM FVGRMEFAAA ISARTALPCA
IFAINVGELE HVAARFGQDY ADRVMIDLGR RLEATQGQLN CAALLDPHVF VVMVVDFSTD
ALAWCGDAQA LAQRAAANPD AVLDELQDEL RGLLEAPVRI EGHEFSVPTR IGCASIGHGK
GDPKNVLDHV LAASGWEATG EA
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