Gene Bphy_5955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5955 
Symbol 
ID6247527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp479577 
End bp480224 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content62% 
IMG OID642597663 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001862065 
Protein GI186470747 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.132796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCCTC ACACAGTACT TCTGATCGAC GACCATGCGT TGTTTCGCAA GGGCGTCGCG 
CAACTGATCC AGATGAACCC GTCGTTCGAG GTCACGGGCG AAGCAACCTC GGGTCAGGAT
GGCATCGAGA TGGCCGTGCG GCTCAAGCCG GACGTCGTGC TGATCGACCT GAACATGCCG
CGCATGAACG GTATCGAAAC GCTCGAAGGC ATGCGCCAGG CCGGCGTCGA CGCGCGCTTC
ATCATGCTCA CGGTGTCGGA CAACGAACGC GACGTAGTCG CCGCATTGCG CGCGGGCGCA
CACGGGTATC TGCTGAAGGA CATGGACCCC GAGGACTTGT GCGTGTCGCT GCAGAAGGCG
CTGAAAGGCA CGGCCGTGCT GAGCGAATCC GTTACGGGCA GTCTCGTTCA CGCGCTCTCG
GGCGGCCAGC GCATTCCCGC TGCGCAGAAC GATCTGACGG CGCGCGAACT CGAGGTGTTC
GATTACCTCG TGGCGGGCCT GTGCAACAAG GCGATCGCAC GCAAGCTCGA CATCAGCGTC
GGCACGGTCA AGGTGCACGT CAAGCACGTG CTGCGCAAGC TCGATCTTCA CTCGCGTCTC
GAAGCCGTGC TGTGGCAACA GGAACACGGC TCACGTTCGC ATCACTGA
 
Protein sequence
MVPHTVLLID DHALFRKGVA QLIQMNPSFE VTGEATSGQD GIEMAVRLKP DVVLIDLNMP 
RMNGIETLEG MRQAGVDARF IMLTVSDNER DVVAALRAGA HGYLLKDMDP EDLCVSLQKA
LKGTAVLSES VTGSLVHALS GGQRIPAAQN DLTARELEVF DYLVAGLCNK AIARKLDISV
GTVKVHVKHV LRKLDLHSRL EAVLWQQEHG SRSHH