Gene Bphy_5879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5879 
Symbol 
ID6247451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp397060 
End bp397407 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content59% 
IMG OID642597587 
Producttransport-associated 
Protein accessionYP_001861989 
Protein GI186470671 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TCCACTTCGG CAGTTTGCTG GTCGTCGCCG CATGCGCGAC GTCGAACGTA 
TTCGCGCAAG CGTCAAACGC CATGCCGATG GCGTCGAGTC CCGCTGGCGG TTCAGGCAAA
GGGGCGACAT CCGACAAACA ACTCGCTCGC GATGTGCGTA AGGCGCTATC GAAAGCGCCC
CACTTCAACG TGTCGAACGT GTTCGTCAAG GCGCGCGGCG GTGTCGTCAC GCTGTCAGGC
AGCGTGTCGG ACGGTGCCCA GATCCAGCAG GCCACAGAAG TTGCAATGGG GGTGCCGGGC
GTAACGTCGG TGAATAACCA TCTGACGATG TATACGAAAG GCTATTAG
 
Protein sequence
MKAFHFGSLL VVAACATSNV FAQASNAMPM ASSPAGGSGK GATSDKQLAR DVRKALSKAP 
HFNVSNVFVK ARGGVVTLSG SVSDGAQIQQ ATEVAMGVPG VTSVNNHLTM YTKGY