| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5855 |
|---|
| Symbol | |
|---|
| ID | 6247427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 362579 |
|---|
| End bp | 365164 |
|---|
| Gene Length | 2586 bp |
|---|
| Protein Length | 861 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642597563 |
|---|
| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
|---|
| Protein accession | YP_001861965 |
|---|
| Protein GI | 186470647 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1049] Aconitase B |
|---|
| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.80419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAA ACTTTCGTGC TCATGTCGCC GCGCGCGCCG CGCTCGGCAT TCCTCCCCTG
CCGCTGACAG CCCAACAGAC CGCCGAGCTG GTGGAACTGC TGACCAACCC GCCTGCCGGC
GAAGAGCAGA CGCTGCTCGA CCTGATCACC AACCGCGTGC CTGCCGGCGT GGACGAAGCT
GCACGCGTGA AGGCCGGCTT CCTTGCAGCC GTGGCCAAGG GCGAGACCGC CTGCGCGCTG
ATCTCGCGCG CCCGCGCCAC CGAACTGCTC GGCACGATGC TGGGCGGCTA CAACATCCAG
CCGCTGATCG AGCTGCTGTC CGACGCCGAA GTCGGCACCG TCGCCGCCGA CGCGCTGAAG
AAAACCCTGC TCATGTTCGA CGCGTTCCAC GACGTCAAGG AGCTCGCCGA CAAGGGCAAC
GCCAACGCGA AGGCAGTGCT GCAAAGCTGG GCCGACGCCG AATGGTTCAC CAGCCGTCCG
GAAGTGCCGC AAAGCCTGAC CATCACCGTC TTCAAGGTCA CGGGCGAAAC CAACACCGAC
GACCTGTCGC CCGCCCCGGA CGCCACCACG CGCCCGGACA TCCCGATGCA CGCGCTGGCG
ATGCTGAAGA ACGCCCGTCC TGGCATCACC CCGGAAGAAG ACGGCAAGCG CGGCCCGGTC
AAGTTCATTG AGTCGCTGAA GGAAAAGGGC CACCTGGTCG CCTACGTGGG CGACGTGGTC
GGCACGGGCT CCTCGCGCAA GTCGGCCACC AACTCGGTGC TGTGGTTCAC GGGCGAAGAC
ATCCCGTACA TCCCGAACAA GCGCTTCGGC GGCGTGTGTC TCGGCGGCAA GATCGCGCCG
ATCTTCTACA ACACGATGGA AGACGCCGGC GCCTTGCCGA TCGAACTCGA CGTGTCGAAG
ATGGAAATGG GCGACGTGGT CGAACTGCGT CCGTACGAAG GCAAGGCGCT GAAGAACGGC
GAAGTAATCG CCGAGTTCCA GGTCAAGTCC GACGTGCTGT TCGATGAAGT GCGCGCCGGC
GGCCGCATTC CGCTGATCAT CGGTCGCGGA CTGACGGGCA AGGCACGCGA AGCGCTGGGC
CTCGCGCCGT CGACGCTGTT CCGCCTGCCG CAGCAGCCGG CCGACAGCGG CAAGGGCTTC
TCGCTCGCGC AGAAGATGGT CGGCCGCGCA TGTGGCTTGC CGGAAGGCCA GGGCGTCCGC
CCGGGCACGT ACTGCGAACC GAAGATGACC TCGGTCGGCT CGCAGGACAC GACGGGCCCG
ATGACCCGCG ACGAACTGAA GGACCTGGCA TGCCTGGGTT TCTCGGCTGA CCTCGTCATG
CAGTCCTTCT GTCACACGGC AGCGTATCCC AAGCCGGTGG ACGTGAAGAC GCACCAGACG
CTGCCGAACT TCATCAGCAA CCGCGGCGGC ATCGCGCTGC GCCCGGGCGA CGGCGTGATC
CACTCGTGGC TGAACCGTAT GCTGCTGCCC GACACCGTCG GCACGGGCGG CGACTCGCAC
ACGCGCTTCC CGATCGGCAT CAGCTTCCCG GCCGGTTCGG GCCTCGTCGC CTTCGCCGCT
GCTACGGGCA CCATGCCGCT GGACATGCCG GAATCGGTGC TGGTTCGCTT CAAGGGCAAG
ATGCAGCCGG GCGTGACGCT GCGTGACCTG GTCAACGCGA TCCCGCTGTA CGCGATCAAG
CAAGGCACGT TGACGGTTGC CAAGCAAGGC AAGAAGAACA TCTTCTCCGG GCGCATTCTC
GAAATCGAAG GCCTGCCCGA TCTGAAGGTT GAGCAAGCGT TCGAACTGTC GGATGCATCG
GCCGAGCGCT CGGCTGCCGG TTGCACGGTC CATCTGAACA AGGAACCGAT CATCGAGTAT
CTCAACAGCA ACATCACGCT GCTGAAGTGG ATGATCGCTC AAGGGTACCA GGACCCGCGC
AGCCTGCAGC GCCGCATCAA GGCGATGGAA CAGTGGCTGG CCGACCCGCA ACTGCTGTCG
CCGGATGCCG ACGCCGAATA CGCCGCCGTC ATTGAGATCG ACCTGGCTGA CATCCACGAG
CCAATCGTGG CCTGCCCGAA CGATCCGGAC GATGTGAAGA CACTGTCGGA CGTGGCCGGT
GCGAAGATCG ACGAAGTATT CATCGGCTCG TGCATGACCA ACATCGGCCA CTTCCGTGCG
GCGTCGAAAC TGCTGGAAGG CAAGCGCGAT ATTCCCGTCA AGCTGTGGGT CGCTCCGCCG
ACCAAGATGG ACCAGAAGCA ACTGACCGAA GAAGGCCATT ACGGCGTGTT CGGCACGGCG
GGTGCGCGTA CGGAAATGCC GGGCTGCTCG CTGTGCATGG GTAACCAGGC GCAGGTGCGC
GAAGGCGCGA CGGTCATGTC CACCTCGACC CGTAACTTCC CGAACCGCCT GGGCAAGAAC
ACGAACGTGT ACCTCGGCTC GGCGGAACTG GCGGCGATCT GCTCGCGTCT GGGCAAGATC
CCGACCAGGG AAGAGTACAT GGCCGACATG GGCGTGCTCA ACGCAAACGG CGACAAGATC
TATCAATACA TGAACTTCGA CCGGATCGAA GACTTCAAGC AGGTGGCCGA CACTGTCACG
ATGTAA
|
|---|
| Protein sequence | MLENFRAHVA ARAALGIPPL PLTAQQTAEL VELLTNPPAG EEQTLLDLIT NRVPAGVDEA
ARVKAGFLAA VAKGETACAL ISRARATELL GTMLGGYNIQ PLIELLSDAE VGTVAADALK
KTLLMFDAFH DVKELADKGN ANAKAVLQSW ADAEWFTSRP EVPQSLTITV FKVTGETNTD
DLSPAPDATT RPDIPMHALA MLKNARPGIT PEEDGKRGPV KFIESLKEKG HLVAYVGDVV
GTGSSRKSAT NSVLWFTGED IPYIPNKRFG GVCLGGKIAP IFYNTMEDAG ALPIELDVSK
MEMGDVVELR PYEGKALKNG EVIAEFQVKS DVLFDEVRAG GRIPLIIGRG LTGKAREALG
LAPSTLFRLP QQPADSGKGF SLAQKMVGRA CGLPEGQGVR PGTYCEPKMT SVGSQDTTGP
MTRDELKDLA CLGFSADLVM QSFCHTAAYP KPVDVKTHQT LPNFISNRGG IALRPGDGVI
HSWLNRMLLP DTVGTGGDSH TRFPIGISFP AGSGLVAFAA ATGTMPLDMP ESVLVRFKGK
MQPGVTLRDL VNAIPLYAIK QGTLTVAKQG KKNIFSGRIL EIEGLPDLKV EQAFELSDAS
AERSAAGCTV HLNKEPIIEY LNSNITLLKW MIAQGYQDPR SLQRRIKAME QWLADPQLLS
PDADAEYAAV IEIDLADIHE PIVACPNDPD DVKTLSDVAG AKIDEVFIGS CMTNIGHFRA
ASKLLEGKRD IPVKLWVAPP TKMDQKQLTE EGHYGVFGTA GARTEMPGCS LCMGNQAQVR
EGATVMSTST RNFPNRLGKN TNVYLGSAEL AAICSRLGKI PTREEYMADM GVLNANGDKI
YQYMNFDRIE DFKQVADTVT M
|
|---|
| |