| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5843 |
|---|
| Symbol | |
|---|
| ID | 6247416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 350930 |
|---|
| End bp | 351778 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642597552 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001861954 |
|---|
| Protein GI | 186470636 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGATC TCGAACTCCT GAAGACGCTC GTTTGCGTCG TCGACGAAGG CAGTTTCACG
CGGGCGGGCG ATCGCGTGCA CCGCACGCAG TCCACCGTCA GCCAGCAGGT GCGACGTCTG
GAGGAACGGG TGGGGCGCAC GTTGCTGATG CGCGACCGCA CGGGCAATCA GGTGACGGCG
ACCGAACATG GCGAGTTGCT CACGCACTAT GCGCGCCGTC TGATCGCGCT GTCACAGGAG
GCGCAGGACG CGCTCGCCAG CGACGTATCG CGCGTGCCGA TCCGCATCGG GGTACCCGAG
GACTTTTGCG CGAAGCGTAT GGCGTCGATC CTGTCGGGCT TCGTGAAGGC GCGGCCGGAT
GCGCGGCTCG AAACGGTCAC GGGCATGAGC GGCGATCTGC AGCGCAAGCT GTCAGGCGGC
GAGATCGATA TCGCGCTGGT CAAGCGCGAG CCGGGCAGCG GGCCGAGTCT CGCTGCATGG
CCCGAATCGC TCGTGTGGGT GCGCGGCCGC CAGGTCGAAG TGCCGTCCGA AGAGGGCGAA
CCCGTTCCGC TCGCGCTGTT TCCGCAAGGC TGCGTGTACC GCAAGCGCGC CATCCGCACG
CTCGATCAGT CGAAACGCAG CTGGCGGGTC GCATTCGGCA GCCACAGCCT GACGGGTATT
CAGGCAGCGG TGGCTTCCGG GCTCGGCATC ACGGTTCTGC CGACTACGGC CGTGCTGCCC
GAGCACAGCC TGTGCTTCGA TCTGCCGCGT CTGCCGCCCA CCGAACTCGC GTTGGTCGGT
GCGGGCGGCG CGCTGAACGC GGTGCAGTCC GCGCTCGTCG ATTTTCTGCG CGAAGCGGTG
ACCGTCTAG
|
|---|
| Protein sequence | MLDLELLKTL VCVVDEGSFT RAGDRVHRTQ STVSQQVRRL EERVGRTLLM RDRTGNQVTA
TEHGELLTHY ARRLIALSQE AQDALASDVS RVPIRIGVPE DFCAKRMASI LSGFVKARPD
ARLETVTGMS GDLQRKLSGG EIDIALVKRE PGSGPSLAAW PESLVWVRGR QVEVPSEEGE
PVPLALFPQG CVYRKRAIRT LDQSKRSWRV AFGSHSLTGI QAAVASGLGI TVLPTTAVLP
EHSLCFDLPR LPPTELALVG AGGALNAVQS ALVDFLREAV TV
|
|---|
| |