Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5842 |
Symbol | |
ID | 6247415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 350109 |
End bp | 350813 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642597551 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_001861953 |
Protein GI | 186470635 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTCG AAAACACACG CCGCCCGTCG TGGCTGACCT TTGATTGCTA CGGCACGCTG ATTCAATGGG ACGAAGGGCT GCAGAACGCC GTGTCCGCGA TCCTGGCAAG CAAGCACGCA GCTGCCATCG ATCCTCGCAA GTTCATTGCC GTCTACGACC GTCACGAGCA TGCGCTCGAA CAGACGCCGC CGCACCGCTC GTTTCGCGAG GTCGCGGGCG AGGCGCTGCG CATCGCGCTC GAAGAATTCG ACCTGCACGC GGAGGTCAGC GACATCCGCC TGCTCACTGA GCGCATCTCC GCGATGCCGC CCTTCCCTGA AGTGGTCGCC ACGCTGCATG CATTGAAGGA AGCCGGCTAC CGGCTGTGCA TCGTGTCGAA CACCGACGAC GACGTGATTG CGGGCAACGT CGCGCAACTC GGCGGCCATA TCGACCGCGT CATTACCGCG CAGCAGGCGG GCGCATACAA ACCCGACCGG CGGCTTTTCG ACTATGCTCA CGAACAGCTC GGCGTCGCGT ATGACGACGT CGTGCATATC TGCGCGAGCC CGCATCTGGA TCATGCGGCG GCGCGCGACA TCGGCTTTCG TTGCGTGTGG ATCGATCGCG GCACGGGGCG CCAGCTCTTG CCGGACTACA CACCCGACGC GATTCTGGCG ACGCTCGGCC AGGTGCCTCC GCTGTTCACG TCGCTCGGCT GGTGA
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Protein sequence | MSLENTRRPS WLTFDCYGTL IQWDEGLQNA VSAILASKHA AAIDPRKFIA VYDRHEHALE QTPPHRSFRE VAGEALRIAL EEFDLHAEVS DIRLLTERIS AMPPFPEVVA TLHALKEAGY RLCIVSNTDD DVIAGNVAQL GGHIDRVITA QQAGAYKPDR RLFDYAHEQL GVAYDDVVHI CASPHLDHAA ARDIGFRCVW IDRGTGRQLL PDYTPDAILA TLGQVPPLFT SLGW
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