Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5813 |
Symbol | |
ID | 6247387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 320677 |
End bp | 321324 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642597523 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001861925 |
Protein GI | 186470607 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.118405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAG TAATCCTTGC CGACGACCAC ACGCTCGTGC GTGACGGGCT GCGCCACATC CTGCAATCCG CGAGCGGCTT CAAGGTGGCG GGCGAAGCTT GCGACAGCGC GACCACGCTC GCGCTCGTCC GCGCCACGGA TGCGCACGTG CTCGTGCTCG ACCTGTCGAT GCCCGGCCGC AACGGCATCG ATCTCATCAG GCAGATCAAG GACGAAAAGC CCGCGCTGCG CATTCTCGTG CTAACCATGC ACGCGGAGCA GCAATACGCG GTGCGGGCGT TCAAGGCAGG CGCATCCGGC TATATGACGA AGGAAAGTGC AAGCGCCGAG CTGGTCGGCG CCGTGACCAA GGTGGCGGCG GGCGGCGTCT ACGTCAGTCT CGCGATGGCC GAGCGCTTCG CGCAAAACCT CACCGAGCCC GCCGAAGCGC TCCCGCATCA ACGGCTATCC CCCCGTGAAT TCGACGTGTT CCGGCGTATC GTCGCCGGGC AGACGACCAC CGGAATCGCG CTCGAACTTT GCCTGAGCGT CAAAACCGTC AGTACGCACA AGGCTCACAT CCTCGAAAAG ATGCAGATGC CGAACGAAAA CGGGCTCGTG CGTTATGCGA TCCGCCACAA GCTGATCGAC GGCGAAGCCG ACATTTGA
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Protein sequence | MIKVILADDH TLVRDGLRHI LQSASGFKVA GEACDSATTL ALVRATDAHV LVLDLSMPGR NGIDLIRQIK DEKPALRILV LTMHAEQQYA VRAFKAGASG YMTKESASAE LVGAVTKVAA GGVYVSLAMA ERFAQNLTEP AEALPHQRLS PREFDVFRRI VAGQTTTGIA LELCLSVKTV STHKAHILEK MQMPNENGLV RYAIRHKLID GEADI
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