Gene Bphy_5809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5809 
Symbol 
ID6247383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp317250 
End bp318350 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content64% 
IMG OID642597519 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001861921 
Protein GI186470603 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain
[COG4585] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.325789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.250191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGC CGAAGAACAA GCCGTCCTGC ATCGCGAGAG CGGCATCCGT GTCGGATGCC 
CCGCTCGAAG ACCGCTATAT GCTGCTGATC GAAGCCGTCC AGGATTACGC GATCTTCATG
CTCGACGCGG GCGGCAACAT CGCCAGCTGG AATCCGGGCG CGCAGCGAAT CAAGGGCTAC
ACGCACGACG AGATCATCGG CCGGCACTTC TCGACGTTCT ATACGGAAGA GGACATCGCC
GCCGGCAAGC CCGCGCGCGA ACTGCAGATC GCAGCCGCCG AAGGACACGT CGAAGACGAA
GGCTGGCGGG TTCGGCGCGA CGGTTCGCGG TTCTGGGCCA ACGTCACCAT TTCCGCCGTG
CGCGACGCGA ACGGCGCGTT GCTCGGCTTC GCGAAGGTGA CGCGCGACAT GACCGACCGC
ATGCGCCTCA CGGAGCTCGA ACGCGCGAGC GAGGTGTCGG CGCAAGTGCA GATCACGCGA
GAAAACGAGC AAAAACGCAT CGCGCGCGAA TTGCACGACG ACCTCGGCCA GCAATTGACG
GCGCTGAAAA TGAGCGTCGC ACTGATCGAA GCGACACTCG CCCAAAAGGA CGACACCGCG
CATCTCGTGC CGCAGACCCA CGCACTGCAA AAGGAAATCG ACGCCATGGC GATGTCGCTG
CGCCGCATCG CCGCGGACCT GCGTCCTCCG CTGCTCGACG ATCTCGGTTT GACGGCCGCA
CTCGAATGGC TCGCCGAAGA CTTCACGAAG CGCTACCGTG TCGCCGCAAC GGTCCACGTC
GAAGCGGACG AACCCCAGTT CAACGAATTC GCGTCGACGA CACTGTTTCG CATCGTCCAG
GAAGCACTGA CCAACGTCGC GCGCCACGCG GCCGCGAGCC ATGTGCGCAT CGAGCTTGCG
CGCGACGGCG CCACGGTGTC GCTCGAAATC GAAGACAACG GTGTGGGCGC GAAGCCCGGC
TTGCCGTCCG GCAACAAGTC GTTCGGCCTG CTCGGCATCC GCGAACGCGT CAGGCAATTG
CACGGCACCG TGTCGTATAT CAGTTCGCCC GGCGCGGGCT TTCGCATGTC GATCCGCGTG
CCCATTGCCG ACGTGCGATG A
 
Protein sequence
MATPKNKPSC IARAASVSDA PLEDRYMLLI EAVQDYAIFM LDAGGNIASW NPGAQRIKGY 
THDEIIGRHF STFYTEEDIA AGKPARELQI AAAEGHVEDE GWRVRRDGSR FWANVTISAV
RDANGALLGF AKVTRDMTDR MRLTELERAS EVSAQVQITR ENEQKRIARE LHDDLGQQLT
ALKMSVALIE ATLAQKDDTA HLVPQTHALQ KEIDAMAMSL RRIAADLRPP LLDDLGLTAA
LEWLAEDFTK RYRVAATVHV EADEPQFNEF ASTTLFRIVQ EALTNVARHA AASHVRIELA
RDGATVSLEI EDNGVGAKPG LPSGNKSFGL LGIRERVRQL HGTVSYISSP GAGFRMSIRV
PIADVR