Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5809 |
Symbol | |
ID | 6247383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 317250 |
End bp | 318350 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642597519 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001861921 |
Protein GI | 186470603 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.325789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.250191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACGC CGAAGAACAA GCCGTCCTGC ATCGCGAGAG CGGCATCCGT GTCGGATGCC CCGCTCGAAG ACCGCTATAT GCTGCTGATC GAAGCCGTCC AGGATTACGC GATCTTCATG CTCGACGCGG GCGGCAACAT CGCCAGCTGG AATCCGGGCG CGCAGCGAAT CAAGGGCTAC ACGCACGACG AGATCATCGG CCGGCACTTC TCGACGTTCT ATACGGAAGA GGACATCGCC GCCGGCAAGC CCGCGCGCGA ACTGCAGATC GCAGCCGCCG AAGGACACGT CGAAGACGAA GGCTGGCGGG TTCGGCGCGA CGGTTCGCGG TTCTGGGCCA ACGTCACCAT TTCCGCCGTG CGCGACGCGA ACGGCGCGTT GCTCGGCTTC GCGAAGGTGA CGCGCGACAT GACCGACCGC ATGCGCCTCA CGGAGCTCGA ACGCGCGAGC GAGGTGTCGG CGCAAGTGCA GATCACGCGA GAAAACGAGC AAAAACGCAT CGCGCGCGAA TTGCACGACG ACCTCGGCCA GCAATTGACG GCGCTGAAAA TGAGCGTCGC ACTGATCGAA GCGACACTCG CCCAAAAGGA CGACACCGCG CATCTCGTGC CGCAGACCCA CGCACTGCAA AAGGAAATCG ACGCCATGGC GATGTCGCTG CGCCGCATCG CCGCGGACCT GCGTCCTCCG CTGCTCGACG ATCTCGGTTT GACGGCCGCA CTCGAATGGC TCGCCGAAGA CTTCACGAAG CGCTACCGTG TCGCCGCAAC GGTCCACGTC GAAGCGGACG AACCCCAGTT CAACGAATTC GCGTCGACGA CACTGTTTCG CATCGTCCAG GAAGCACTGA CCAACGTCGC GCGCCACGCG GCCGCGAGCC ATGTGCGCAT CGAGCTTGCG CGCGACGGCG CCACGGTGTC GCTCGAAATC GAAGACAACG GTGTGGGCGC GAAGCCCGGC TTGCCGTCCG GCAACAAGTC GTTCGGCCTG CTCGGCATCC GCGAACGCGT CAGGCAATTG CACGGCACCG TGTCGTATAT CAGTTCGCCC GGCGCGGGCT TTCGCATGTC GATCCGCGTG CCCATTGCCG ACGTGCGATG A
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Protein sequence | MATPKNKPSC IARAASVSDA PLEDRYMLLI EAVQDYAIFM LDAGGNIASW NPGAQRIKGY THDEIIGRHF STFYTEEDIA AGKPARELQI AAAEGHVEDE GWRVRRDGSR FWANVTISAV RDANGALLGF AKVTRDMTDR MRLTELERAS EVSAQVQITR ENEQKRIARE LHDDLGQQLT ALKMSVALIE ATLAQKDDTA HLVPQTHALQ KEIDAMAMSL RRIAADLRPP LLDDLGLTAA LEWLAEDFTK RYRVAATVHV EADEPQFNEF ASTTLFRIVQ EALTNVARHA AASHVRIELA RDGATVSLEI EDNGVGAKPG LPSGNKSFGL LGIRERVRQL HGTVSYISSP GAGFRMSIRV PIADVR
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