| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5791 |
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| Symbol | |
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| ID | 6247365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 299211 |
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| End bp | 299996 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597501 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001861903 |
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| Protein GI | 186470585 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.524873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.240055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGA AAGGCAAAGG CGCACTTGTG ACGGGATCGT CGAACGGCCT GGGGCTTGCG
ATGGCGCGTG CGCTTGCGGG GGCCGGTTGC GACATCGTGC TGCACGGCCT CGAAACGCCG
CAGCAGATGG CGCGCACGAC AGATGAGCTG GCTGCATCGT TCGATGTGAA TGTCGCATAC
GTGCAGTCGG ATCTCGCGAG TGCAGCTGGT GTCGATGCAC TGATCGACAA CGCGCAGGCA
AGGATGAAGA CGCTCGACGT GCTCATCAAC AATGCGGTGG TGCGCCACTT CGCGGGTCTC
GAATCGTTTC CGCTCGAACA CTGGAACAAC GCGCTTGCCG TGAATCTGAC GGCCGCGTTT
CGCGCGATTC AACTGACTTT GCCCGGGATG CGCGAGCGCG GCTGGGGACG CATCTTCAAC
ATGACTTCGG TGTACGGCGC CCGCGCCATC GCGAATCGCG TGGACTATGT GACGACGAAG
ACGGCGCTGC TCGGCCTCAC GCGCTCGGTT GCCATCGAAA CGCTGAATCA GGGCATCACG
TGCAATGCAA TCTGTCCGGG CTCGGTGCTG ACGCCGAACA TCGATAGCCG CATTGATGCG
GTGATGCGCG AGCGCGGCCT CCAACGCAGC GATGCGGTGC GTGAATTTCT CAAGGGCAAG
CAGCCGACGG GCGAACTGGT CGATGCCGCG CATGTCGGCG AGTTGGTCGT GTTTCTGTGC
GGGCCATCGG CGAGCCAGAT CACGGGTGCA ATGATGCCGA TCGAAGGAGG CTGGCTTGCA
GGCTGA
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| Protein sequence | MTLKGKGALV TGSSNGLGLA MARALAGAGC DIVLHGLETP QQMARTTDEL AASFDVNVAY
VQSDLASAAG VDALIDNAQA RMKTLDVLIN NAVVRHFAGL ESFPLEHWNN ALAVNLTAAF
RAIQLTLPGM RERGWGRIFN MTSVYGARAI ANRVDYVTTK TALLGLTRSV AIETLNQGIT
CNAICPGSVL TPNIDSRIDA VMRERGLQRS DAVREFLKGK QPTGELVDAA HVGELVVFLC
GPSASQITGA MMPIEGGWLA G
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