Gene Bphy_5700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5700 
Symbol 
ID6247204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp192085 
End bp193002 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID642597416 
Productribonuclease BN 
Protein accessionYP_001861818 
Protein GI186470500 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0471671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGA ATCGAGAACG ACCCACGTCA CGCCTGCAGG CGGTTCATCG GAAGGTGACG 
GTGGTGGGCG CGGCGAAGGA CACGATCGGC CGCTTCTCGA ACCACCGATG CGCGATGATG
GGATCGAGCA TCGCGTTTTA CTGCGCGTTC TCGCTCGCCC CGACGCTGCT CATCGTGCTC
GCGGTGCTCG GCTGGTTCTT TGGCCAGGAC GCCGCGCAGG GACGACTGTT CGGCCAGGTG
AAAGACATTG TCGGAACGGA GGCGGCGAGC GCGATGCAGG CGATCGTCGA GCATGCGCAT
CGTTCGCACG CCGGCGGTTT CGCGGCCCTG ATTTCGGTGG TGCTGCTTGC GGTCGGCGCA
TCCGCGACGT TCTCGTCGCT CAACACGGCG CTCGACGTCG TGTTTGCCGT GCGCGCGCCG
AAAGGCATCG CCGGCGTCGC GCTGTTGCTG CGCGCACGGC TGGTGTCGCT GGGACTCGTG
ATGGGGCTCG CGTTTCTACT GGTCGTGTCG CTCGTGGTGG ACGTCGCGAT TCAAACCGTC
GGCAGCATGC TGTTCGGAAC GGACGCGCTC AACGCGTTCG CCGACGCCGC GCAATCCGTG
TTCGGTCTGG CGCTGCTGAC GGTCGGTCTC GGTGCGCTCA TCAAGTGGCT GCCGGACACG
CATGTCGCAT GGCGTCCAGC CGTTGTGGGG GGCTTCGTCG CGGCCTTTCT CTTCACGGCG
GGGCGGCATT TGTTCGTGCT GTATCTTGCG CATGCCGGGA CGGCGGGCGC GTTCGGCGCG
GCAGGCTCGC TGGCCGTGCT CATGATGTGG CTGTATTTCT GCGCCGTCGT CTTTCTGCTG
GGCGCGGAGG TCACGGCAAC GCTTGGCGGC GCGCCCCACG ACGAGGCGGC ATTCGAGCAC
GAAACCGCGC ATCGCTGA
 
Protein sequence
MDTNRERPTS RLQAVHRKVT VVGAAKDTIG RFSNHRCAMM GSSIAFYCAF SLAPTLLIVL 
AVLGWFFGQD AAQGRLFGQV KDIVGTEAAS AMQAIVEHAH RSHAGGFAAL ISVVLLAVGA
SATFSSLNTA LDVVFAVRAP KGIAGVALLL RARLVSLGLV MGLAFLLVVS LVVDVAIQTV
GSMLFGTDAL NAFADAAQSV FGLALLTVGL GALIKWLPDT HVAWRPAVVG GFVAAFLFTA
GRHLFVLYLA HAGTAGAFGA AGSLAVLMMW LYFCAVVFLL GAEVTATLGG APHDEAAFEH
ETAHR