Gene Bphy_5650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5650 
Symbol 
ID6247156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp130315 
End bp131181 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID642597368 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001861770 
Protein GI186470452 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.260037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.829409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA AGATCGAAAC AATCGGCATC GTCGGCGCGG GCACGATGGG CAACGGCATC 
GCGCAGGTAG CGGCGGTCGC AGGGCTGAAG GTCGTGCTCA TCGACGTGAC GGACGCGGCG
CTTTCGAAGG GCGTCGCGAC GCTCACCGGC AGTCTCGCGA AGCTCGTCGA GAAGGGCAAG
GTCGAAGCGG CCGCACGCGA TGCCGCGCTC ACGCGCATCG AGACGTCGAC CGACTATCAG
CGCCTCGCCA GCGCGGACAT CGTCGTGGAA GCGGCGACGG AGAACGCTGA ACTGAAAGTC
CGCATTCTGA AGCAGATCGA ATCCGTCGTG AGCGACGACA CGATCGTCGC GTCGAACACG
TCGTCGATTT CGATTACGGC GCTGGCCGCG ACGATCGGCA GGCCGGAGCG CTTCGTCGGC
ATGCACTTCT TCAACCCGGT GCCGCTGCTG CCGCTCGTCG AAGTAATCCG CGGCGTGCAG
ACCAGCGACG ACACTGCGAC GGCCGTGCGC GAACTGACGG AGCGCCTTGG CAAGACGCCC
GTCAGCGTCA AGAACGCGCC GGGCTTCGTG GTCAACCGCA TCCTCGTGCC GATGATCAAT
GAGGCATTCT TCCTGCTCGC GGAAGGCACC GCGACGGCGG AAGAGATCGA CGCTGGCATG
CGCCTCGGTG CGAACCATCC GATCGGGCCC CTCGCGCTCG CGGACCTGAT CGGTCTCGAC
GTGTGCCTGT CCGTGATGGA TGTATTCCTG AAGGACTTCG GCGATTCGAA ATATCGCGCG
TGCCCGCTGC TGCGCGAACT CGTTGCCGCC GGGCGTCTGG GCCGCAAGAC GGGGCACGGT
GTATATCGCT ACGATCCGAA GCACTGA
 
Protein sequence
MAKKIETIGI VGAGTMGNGI AQVAAVAGLK VVLIDVTDAA LSKGVATLTG SLAKLVEKGK 
VEAAARDAAL TRIETSTDYQ RLASADIVVE AATENAELKV RILKQIESVV SDDTIVASNT
SSISITALAA TIGRPERFVG MHFFNPVPLL PLVEVIRGVQ TSDDTATAVR ELTERLGKTP
VSVKNAPGFV VNRILVPMIN EAFFLLAEGT ATAEEIDAGM RLGANHPIGP LALADLIGLD
VCLSVMDVFL KDFGDSKYRA CPLLRELVAA GRLGRKTGHG VYRYDPKH