| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5630 |
|---|
| Symbol | |
|---|
| ID | 6247136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 106908 |
|---|
| End bp | 109052 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642597348 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001861750 |
|---|
| Protein GI | 186470432 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.11737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCATG CAGTTGCTTC CGCGCGGCAG CCGGTCAACA TTCTCGTGGT AGACGATCTG
CCGCAACAGC ATGTCGTGAT GCGAACGGTC CTCGAAGAAC TCGGGGAGAA TGTCATTACC
GTCGCATCGG GCCGCGAAGC GTTGAAAGCC GTACTCGAAC GGGCCTTCGC AGTCATTCTG
CTCGACGTGA ACATGCCCGG CATGGACGGT CTCGAAACGG CGTCGCTGTT GCGAACCTAT
CGGCGCACGG CGCGAACACC GATCATTTTC GTGACTGCGT ATATCGACGA ATCGGAGATG
AAGCGGGCCT ATTCGCTGGG CGCCGTCGAC TATATTTCCG CCCCTGTCGT GCCGGAAATC
CTGCGCTCGA AGGTCAAGGT TTTCGTCGAA ATGCACCGCA TGCATCACGA GTTGTTGTCG
CGGGCGGAGG AACGGGAAGC CATCGTTCGG GCGGAAGCCG GCCGCGCTGC CGCCGAGCAG
GCGCGGCAAC GCGCGGATTT TCTGGCGGCG GCGAGCCATG CGCTGACCCG TTCGCTCGAA
ATCGACGCGA CGTTGCAGCG CATCGCGGAA CTGGCGTGCA GCGAGCTGGC GGATACCGCC
TTCGTCGCGG TGAGAGGCAT CGGCGAATTC TCGACTGGGC TGACAGTGAA GTCAGCAAGA
CGAAACGATG GGAACGCGCC GGATTTCGCT GCCTTCCAGT CGAAGGCGCT CAACCGGGCG
TTTCCTGCCA TCGACCGATT CGTGCATCGA TTGCTGCATG AAGAACAGGT GGAAGTCGAA
CCCGCCGTAG GCGAATGCGT CAGCGAAGCG ATTGAAGGGG CAGCGTTCGT GGAGGGCGTG
CGGCGCGTGA GTGCTTTTCC GTTGTTGACG GGCAACCAGA AGGGCGTGAT CGTGCTTTGC
TCGTCGGAGG CGGCCATGCC TGCCGAGCAG ACGACGTTAT GCCAGGAATT CGTCAGCCGT
GCGTCCATCG CGCTGGAGAA TGCGCTGTTG TTCTCGGCGA TCCGCGACGG CGACAGACGC
AAGAATGAGT TTCTCGCCAT GCTTGCGCAT GAATTGCGCA ACCCGCTCGC GCCCATCGCA
AACGCGGCCG CTGTCATGCG CAGTGCCAGC GAGGGCGATG CGCAAGTGTT GCGCTGGGCT
AGCGAAATCG TCGGAACGCA GGTCGAGCAC ATGGTGCGCA TCGTCGAGGA TCTTCTCGAC
GTGTCGCGTA TTGCGAGGGG GACGGTTGCG CTGCGTCTGA CGCCTGTGCC GCTTTCCATC
GTGATCGGCC GCGCCGTTGA AACCAGCCGG CCTCATTTGA TACGCCGTTC GCAAACCTTG
ATCTGCGACG AAGAGGCCGT CGACATCATC GTCAATGGCG ACGTCGTGCG GCTCGCGCAG
ATTGTCGCGA ACCTGCTCAA CAACGCGTCG AAGTTCACGC CGCAAGGCGG CCACATTTCG
TTATCCACTC GCTTTGCGGA CGGCACGGCG ACCATTACCG TCGCCGACGA CGGTCAAGGC
ATCGACGCTG AGTTTCTGCC GCATGTGTTC GAACTGTTTG CGCAGGCGGA CGGCTCGTTG
CACCGGTCGC TGGGCGGGCT CGGTATCGGT CTCACGCTCG TCAGGCATCT GACGGAACTC
CACGGCGGGT CCGTGCGCTG CAAGAGCGAC GGCCTGGGCA AGGGCTCGGA GTTCGTCGTG
CAACTGCCGG GAACCGTGGC CGAGCGCACG ATGCCGGCGC TTGCGCCCGT CGTGCATCTG
AACCGAAAGG CGGCCATACG CGTGCTGGTG GTCGACGATC TCGTCGCATC GGCGGAAAGC
CTCGAGGCGC TGCTGACGAT ACACGGGTAC ATCGTCAGAT GCGCGATGGA CGGCGCGACT
GCGCTGCAGG CGGCCTCTGA GATGCGGCCG GATGTCATCG TGCTCGACAT CGGACTGCCG
GATATGACGG GGTATGAGCT GGCGAGATAT CTACGTCAGG ATCGCGCCTG TCGAGACGCG
CTGATCATTG CGCTCAGCGG CTATGGTCAG GAAGACAACA TCCGTCAGGC AATGGAGGCA
GGCGTCGATC ATTACCTGGT CAAGCCGGCG GACCTTGCAG TATTGCTCGA TCTGCTGAGT
TCGCGCGATG AAGGGCAAAG CTACGACGGG GTCGCGTCGA CCTGA
|
|---|
| Protein sequence | MDHAVASARQ PVNILVVDDL PQQHVVMRTV LEELGENVIT VASGREALKA VLERAFAVIL
LDVNMPGMDG LETASLLRTY RRTARTPIIF VTAYIDESEM KRAYSLGAVD YISAPVVPEI
LRSKVKVFVE MHRMHHELLS RAEEREAIVR AEAGRAAAEQ ARQRADFLAA ASHALTRSLE
IDATLQRIAE LACSELADTA FVAVRGIGEF STGLTVKSAR RNDGNAPDFA AFQSKALNRA
FPAIDRFVHR LLHEEQVEVE PAVGECVSEA IEGAAFVEGV RRVSAFPLLT GNQKGVIVLC
SSEAAMPAEQ TTLCQEFVSR ASIALENALL FSAIRDGDRR KNEFLAMLAH ELRNPLAPIA
NAAAVMRSAS EGDAQVLRWA SEIVGTQVEH MVRIVEDLLD VSRIARGTVA LRLTPVPLSI
VIGRAVETSR PHLIRRSQTL ICDEEAVDII VNGDVVRLAQ IVANLLNNAS KFTPQGGHIS
LSTRFADGTA TITVADDGQG IDAEFLPHVF ELFAQADGSL HRSLGGLGIG LTLVRHLTEL
HGGSVRCKSD GLGKGSEFVV QLPGTVAERT MPALAPVVHL NRKAAIRVLV VDDLVASAES
LEALLTIHGY IVRCAMDGAT ALQAASEMRP DVIVLDIGLP DMTGYELARY LRQDRACRDA
LIIALSGYGQ EDNIRQAMEA GVDHYLVKPA DLAVLLDLLS SRDEGQSYDG VAST
|
|---|
| |