Gene Bphy_5594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5594 
Symbol 
ID6247258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp59928 
End bp60893 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID642597313 
ProductAraC family transcriptional regulator 
Protein accessionYP_001861715 
Protein GI186470397 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG CCGTGCTCGC GCTCGATGGA CTGTTCGATA CAGGGCTCGC CGTCACGCTC 
GACTCGCTGG GCGCCGCGAA CAAGCTCGCG GCCCGGCTAC CGGGCGTCAC ACCGCGCTTT
GACGTGACCG TGGTCGGCGT GCGCAAGCGC GTGCGCTCTG GACACGGCTT CGCGATCCCC
GTGCAGGCGA TCACGCCCGA CCTGAAGCCG GATTGGGTGA TCGTGCCCGC GCTCGGCGCG
ACGACCCCCG ACCTGCTGAT TCCCGCCCTC GCGCGCGCTG ACGTGAAGCA GGCCACGGCG
CAATTGCAGA CGTGGCGCGC CGAAGGCGCG TTGATCGCAG CATCGTGCAT CGGGACTTTC
CTCGTTGCAG AAGCGGGTCT GCTCGATCAT CGGGAGGCGA CGTCGACGTG GTCCCTCGCA
CCGCTCTTCA GACAACGTTA TCCGAAGGTC TCGCTCGACG AATCGCGCAT GCTGATCGCG
TCCGACATCG GTGTAACGGC GGGCGCGGCG ATGGGCCATC TCGATCTGGC TCTTTGGCTC
ATCCGCAGGG CAAGTCCGGA ACTGGCCACG CTGGTGTCGC GCTACTTGCT AGCCGATATC
CGTTCGCTGC AGGCGCCGTA CATCATTCCC AATCATCTGG CGCAAGCGGA CCCGCTAATG
CAGCGTTTCG AGCGGTGGGC GCGCGATCAC CTGAAAGAAG GCTTCTCGCT GCAGCAAGCG
GCCAACGCAC TGGCGACCAG CGCACGCACG CTGCAGCGCC GCTGCCAGGA AGTGCTCGGG
AAATCGCCGC TCGCATACTT TCAGGACCTG CGCGTCGAGC GTGCGCAATC GCTGCTGCAT
GGCAGCGGGC TCGATCTCGA AGCGATTGCG GCCGAAGTGG GGTATGTCGA CGGCGCGACG
CTGCGAGCGC TGCTGCGTCA ACGACTGGGG CGGGGCGTGA GGGAACTGCG CGCAGATTTG
CGCTAG
 
Protein sequence
MRIAVLALDG LFDTGLAVTL DSLGAANKLA ARLPGVTPRF DVTVVGVRKR VRSGHGFAIP 
VQAITPDLKP DWVIVPALGA TTPDLLIPAL ARADVKQATA QLQTWRAEGA LIAASCIGTF
LVAEAGLLDH REATSTWSLA PLFRQRYPKV SLDESRMLIA SDIGVTAGAA MGHLDLALWL
IRRASPELAT LVSRYLLADI RSLQAPYIIP NHLAQADPLM QRFERWARDH LKEGFSLQQA
ANALATSART LQRRCQEVLG KSPLAYFQDL RVERAQSLLH GSGLDLEAIA AEVGYVDGAT
LRALLRQRLG RGVRELRADL R