| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5592 |
|---|
| Symbol | |
|---|
| ID | 6247256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 57817 |
|---|
| End bp | 59520 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642597311 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001861713 |
|---|
| Protein GI | 186470395 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA GCCAACTGAA GGTGTCGACG CGCCTGCTCG TCGGATTCGG CCTGTTGACA
GGTTTGCTGC TCGCGATAGC GCTCATCAGT TTCTATGGCT TGTCCGCACT GAACGACAAG
CTCGATGAAA TTGCGCGCGT CAACGGCACG CAAGCGCGTC TCGCCAATGA ACTACGCGCG
TCGATTCAGG ATCGCGCGAT CGCGATGCGC AACGTCGTGC TGTACACAAG TGCAGCCGAC
AGGCGCGCCG AAGCCGAGCG AATTGCAAAG CAGAACGAAT TATATGCGAC TGCCTATCAA
GCGCTCGACC GTTCGTTCGC AGAAGAGGCA GGCGTGAATC CACGCGAGCG CGCGCTGATG
ACGGCGCTCA AGCAGGATGA AGCCGCTGCC GCCGCGCCGA TGAACAAGGT GGTCGAACTC
TGTCTGGCGA ACGATACGAT CGTCGCGACG CAACTGCTGC TTGAAAGCGC TCGGCCCACG
CAGCGTGTGT GGCTCGCGCG CGCAACGGAG TTGGCGCAGT TCGAGGATCA GGCAAATCAG
GTTGCGCAGC AGGACGCCGT TGCGACGTAC TCGCGTATTC GCATGCTGAT CGCGTTGATT
GTCGCTGCAT CGGTCGCCCT CGCGCTCATC ACGGCCACAC TGATTACGCG CAGCATCCTT
CGGCAACTGG GCGGTGAGCC GGCCACAGCG CAGGAAGTTG CCGCGCAGAT CGCGCAGGGC
AATCTCGCCG TCAAGGTCGA TCTTTCGAAT AGCGATGCGG ACAGCCTGAT GGGGTCGCTC
GACGCGATGC GTGGACGTCT CACGTCGACT GTCGCCGACA TCAAGGCGGC GGCGGAGTCG
ATTGCCGTTG CGGCGCGCGA AATTGCGCAA GGCAATACGG ATCTGTCGCA GCGCACGGAA
GAGCAGGCGG CGTCGCTGGA AGAAACGGCT GCGAGCATGG AAGAGCTCAC ATCGACTGTC
CGGCAGAACA CCGAGAACGC GCGCCAGGGC AGCACGCTCG CGGGCAATGC GTCGCAGACT
GCGAGCACGG GGGGAGACGT CGTGCGCAAG GTGGTTGCGA CGATGGACGA CATCTCGTCC
AGTTCCTCGC GTGTGTCGGA GATCATCTCG GTGATTGAAG GCATTGCCTT CCAGACGAAC
ATCCTCGCGC TCAACGCAGC CGTCGAAGCC GCGCGTGCGG GTGAAGAGGG ACGCGGCTTC
GCCGTCGTTG CGGGTGAAGT CCGCACGCTT GCGCAGCGCA GCGCAGCGGC CGCGAAGGAG
ATCAAGGAAC TGATCGTGAC GTCGGTGTCG CATGTGACGA CGGGTTCGAC GCTCGTGCAC
GATGCGGGCG CGACGATGGA CGAAGTCGTT CGATCCGTCA AGCGCGTGAC GGACATCATG
AGCGAGATAG CTGCCGCATC GGCGGAGCAA TCGACGGGTA TCGAGCAGGT CAACACGGCC
GTCGCGCAGA TGGATCAGGT GACGCAGCAA AACGCCGCGC TCGTCGAGCA GGCGACGGCG
GCGGCTCAGG CGATGGCCGA TCAGGCCGAT AGCCTCAAGG CGGCAGTGGC GATGTTCAGG
CTTGATGGAG GCGAGCCAGT CGTGCTTGCG ACGAAAGCGC GTACCGTGTC ATCGAAGCAA
AACGCAGCGC CTGCGAAGAA GGCCGTCTTG CAGCATGCGC CTCGCGACGA CTCGCCAACC
GCCGTTGACT GGCAGACGTC TTGA
|
|---|
| Protein sequence | MKLSQLKVST RLLVGFGLLT GLLLAIALIS FYGLSALNDK LDEIARVNGT QARLANELRA
SIQDRAIAMR NVVLYTSAAD RRAEAERIAK QNELYATAYQ ALDRSFAEEA GVNPRERALM
TALKQDEAAA AAPMNKVVEL CLANDTIVAT QLLLESARPT QRVWLARATE LAQFEDQANQ
VAQQDAVATY SRIRMLIALI VAASVALALI TATLITRSIL RQLGGEPATA QEVAAQIAQG
NLAVKVDLSN SDADSLMGSL DAMRGRLTST VADIKAAAES IAVAAREIAQ GNTDLSQRTE
EQAASLEETA ASMEELTSTV RQNTENARQG STLAGNASQT ASTGGDVVRK VVATMDDISS
SSSRVSEIIS VIEGIAFQTN ILALNAAVEA ARAGEEGRGF AVVAGEVRTL AQRSAAAAKE
IKELIVTSVS HVTTGSTLVH DAGATMDEVV RSVKRVTDIM SEIAAASAEQ STGIEQVNTA
VAQMDQVTQQ NAALVEQATA AAQAMADQAD SLKAAVAMFR LDGGEPVVLA TKARTVSSKQ
NAAPAKKAVL QHAPRDDSPT AVDWQTS
|
|---|
| |