| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5588 |
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| Symbol | sdhA |
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| ID | 6247252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 52920 |
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| End bp | 54695 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642597307 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001861709 |
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| Protein GI | 186470391 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCAA TCAAGAATTC CCTGCCGCGC CGCAAATTTG ACGTGGTCAT CGTCGGCGCG
GGCGGCTCGG GCATGCGCGC GTCGCTGCAG CTCGCGCGCG CGGGCCTCTC CGTGTGCGTG
CTCTCGAAGG TGTTCCCGAC GCGTTCGCAC ACCGTCGCGG CGCAGGGCGG CATCGGCGCG
TCGCTCGGCA ACATGAGCGA AGACAACTGG CACTACCACT TCTACGACAC GATCAAGGGC
TCCGACTGGC TCGGCGACCA GGACGCGATC GAGTTCATGT GCCGCGAAGC GCCGAACGCG
GTCTACGAAC TGGAACACTT CGGCATGCCG TTCGACCGCA ACGCGGACGG CACGATCTAC
CAGCGCCCGT TCGGCGGCCA CACCGCGAAC TACGGCGAGA AGCCCGTGCA GCGCGCGTGC
GCTGCCGCTG ACCGGACCGG CCACGCGCTG CTGCACACGC TGTACCAGCA GAACGTCGCG
GCGAAGACGA CGTTCTTCGT CGAATGGATG GCGCTGGACC TGATCCGCGA CGCCGATGGC
GACGTGCTCG GGGTGACCGC GCTGGAAATG GAAACGGGCG ACGTCTATAT CCTCGAAGGC
AAGACCACGC TGTTCGCCAC GGGCGGCGCG GGCCGCATCT TTGCGGCATC GACGAATGCG
TTCATCAACA CGGGCGACGG CCTGGGCATG GCCGCACGCG CGGGCATCCC GCTCGAGGAC
ATGGAATTCT GGCAGTTCCA CCCGACGGGC GTGGCGGGCG CGGGCGTGCT GATCACTGAA
GGCGTGCGCG GCGAAGGCGG CATTCTGCGC AACGCGAACG GCGAGCGCTT CATGGAGCGC
TACGCGCCGA CGCTGAAGGA CCTGGCGCCG CGCGATTTCG TCTCGCGCTC GATGGACCAG
GAGATTAAGG AAGGCCGCGG CGTGGGCCCG AACAAGGACC ACGTGCTGCT GGACCTGTCG
CACATCGGCG CGGAGACGAT CATGAAGCGT CTGCCGTCGA TCCGCGAGAT CGCGCTGAAG
TTCGCAAACG TCGACTGCAT CAAGGAGCCG ATCCCGGTTG TTCCGACCAT CCACTACCAG
ATGGGCGGCA TTCCGACGAA CATCCACGGT CAGGTCGTGG GCACCGCGAA GGGCCACGAA
GACCCGATCA ACGGCTTCTA CGCCGTGGGC GAATGCTCGT GCGTGTCGGT GCACGGGGCA
AACCGGCTGG GCACGAACTC GCTGCTCGAC CTGGTGGTGT TCGGCCGCGC GGCGGGCAAC
CACATCGTCA GGCACGTGAA GGAAATCAAG GAACACAAGC CGCTGCCGGC CGATGCAGCC
GATTTCGCGC TCTCGCGTCT GGCGAAGCTC GACAGCTCGA GCTCGGGCGA GTACGCGCAG
GTTGTCGCGA ACGACATCCG CTCGACGATG CAAAAGCATG CGGGCGTGTT CCGCACGTCG
GCGCTGCTGG CCGAAGGCGT CGAACGCATT CGCGAAGTGG CCGGCCGTGT GGGCAACATC
CACCTGAAGG ACAAGTCGAA GGTATTCAAC ACGGCGCGCG TGGAAGCGCT CGAAGTGGAG
AACCTGATCG AAGTGGCGCG CGCGACGATG GTGTCGGCCG AGGCGCGCAA GGAAAGCCGC
GGCGCACACG CGCAGAACGA CTTCGAACAT CGCGACGACG AGAACTGGCT GCGCCATACG
CTGTGGTACA GCGAAGGCGA CCGCCTCGAC TACAAGCCGG TGCACATGAA CCCGCTGACG
GTCGAATCGG TGCCGCCCAA AGCGCGTACC TTCTAA
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| Protein sequence | MVAIKNSLPR RKFDVVIVGA GGSGMRASLQ LARAGLSVCV LSKVFPTRSH TVAAQGGIGA
SLGNMSEDNW HYHFYDTIKG SDWLGDQDAI EFMCREAPNA VYELEHFGMP FDRNADGTIY
QRPFGGHTAN YGEKPVQRAC AAADRTGHAL LHTLYQQNVA AKTTFFVEWM ALDLIRDADG
DVLGVTALEM ETGDVYILEG KTTLFATGGA GRIFAASTNA FINTGDGLGM AARAGIPLED
MEFWQFHPTG VAGAGVLITE GVRGEGGILR NANGERFMER YAPTLKDLAP RDFVSRSMDQ
EIKEGRGVGP NKDHVLLDLS HIGAETIMKR LPSIREIALK FANVDCIKEP IPVVPTIHYQ
MGGIPTNIHG QVVGTAKGHE DPINGFYAVG ECSCVSVHGA NRLGTNSLLD LVVFGRAAGN
HIVRHVKEIK EHKPLPADAA DFALSRLAKL DSSSSGEYAQ VVANDIRSTM QKHAGVFRTS
ALLAEGVERI REVAGRVGNI HLKDKSKVFN TARVEALEVE NLIEVARATM VSAEARKESR
GAHAQNDFEH RDDENWLRHT LWYSEGDRLD YKPVHMNPLT VESVPPKART F
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