| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5562 |
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| Symbol | |
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| ID | 6247226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 25127 |
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| End bp | 27529 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642597281 |
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| Product | PQQ-dependent dehydrogenase glucose/quinate/shikimate family protein |
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| Protein accession | YP_001861683 |
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| Protein GI | 186470365 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGACG AGAGCAAAGC GGGCACGCCA TCATTGGGTA TCGGGCGATG GCTCAGCGTT
CTGTTTGCCG TGCTGTCCGG GCTTTATCTG CTGATCGGCG GTGTCTGGCT TGTCGCGATA
GGCGGGTCGC CTTATTACAT CGTTGCCGCG ATCATTCTTC TGGTTGTCGC GTGGCTGATT
TATCGCGGCA CCGGGCTCGC GTTGTTACTG TATGCGTTGC TATTGATCGG CACGGTGATA
TGGGCCGTGT TCGAAGCAGG CTTCGATTTC TGGGCGCTTG CGCCACGCAT CGACATCCTC
GTTCTGTTCG GCATCTGGCT GCTGCTGCCG TTCGTGTACC GGCGGCTGGA TGCATCGGCC
CGACGCGGGG CCGCCGCGCT CGCCGTGTGC CTCGTGCTGA CGGGTATTGC ACTTGCCTAT
GCCGCGTTCA ACGATCCGCA GGAACTCAAC GGCAAGGTCT CGCAAAACTC TGGCGTGTCG
CCGACCCAGC CGGACTCGCA TCCCGGCGAC TGGACGGCAT ATGGCCGCAC GCAGGCGGGC
ACGCGTTATT CGCCGCTCGC GCAAATCAAT CAGGACAATG CGAAGGATTT GCAGGTCGCG
TGGACATTCC AGACGGGCGA CAAGAAGGGG CCCAACGATC CCGTCGAAAT CACCAATGAA
GTGACGCCGC TCAAGGTCGG CGCCCTGCTG TATCTGTGCT CGCCGCATCA AATCCTGTTC
GCACTGGATG CCGCCACCGG CAAGGAAAAA TGGCGCTTCG ATCCGGGTCT GAAACCGGAT
CCGAGTTTCC AGCACGTGAC CTGCCGCGGC GTCTCCTATC ACGAGACGAC GGCAGCAGCG
GCAGCGAAAG ACGCAGCCGC GCAAAGCGCG TTGCCCGCGT GTTCGCGCCG TGTGATCCTG
CCCGTCAACG ACGGCCATCT GTTCGAACTC GATGCCGCGA CAGGGCAACG TTGCACCGGC
TTCGGGAACA ACGGCGATCT CGACCTGCAG CATCTGCAAC CCGTGAAGAC GCCCGGTCAA
TATGAGCCGA CGTCGCCGCC CGTCGTGACC GACAAGATCA TCGTCATGGC GGGCGCCGTG
ACCGACAACT ATTCGAATCA CGAGCCGTCG GGTGTGATAC GCGGCTTCGA CGTCGAATCA
GGACGTCTCG TATGGGCCTT CGATCCGGGC TCCGACACGC CAAACACCAT TCCCGACGAC
CAGCACGCAT ACACGGTGAA TTCGCCGAAC TCGTGGGCGC CCGCCGCATA CGACTCGAAG
CTCGATCTCG TCTATCTGCC GATGGGCGTG AAGACGCCGG ACATCTGGGG CGGCGATCGC
ACGCCGCAGT ACGAGCGCTA CGCGAGCGGG CTGCTCGCGC TGCATGCGTC GACCGGCAAG
CTAGCGTGGT TCTATCAGAC CGTCCATCAC GATCTGTGGG ACATGGATCT GCCGGCGCAA
CCGACCATTG CCGATATCAC CGATCGCAAC GGCAACATCG TGCCCGCAAT CTACACGCCC
GCGAAGACGG GCAACATCTT CGTGCTGGAC CGCCGCACGG GCACGCCGAT CGTGCCCGCG
CCTGAACAGC CCGTACCGCA GGGCGCGGCC AAAGGCGACC ATGTGTCGCC GACGCAGCCG
TTCTCGCAGC TCACCTTCCG TCCGCAGAAG AACCTGACGG ACGCCGACAT GTGGGGCGCA
ACGATGTATG ACCAGCTTGC GTGCCGCGTG ATGTTTCACC GGCTGCGGTA CGAAGGCACG
TTCACGCCGC CGTCCGAACA GGGCACACTC GTTTTCCCCG GCAATCTGGG CATGTTCGAA
TGGGGCGGTC TCGCCGTCGA TACGGACCGG CAGCTTGCGA TTGCGAACCC GATCGCGTTG
CCGTTCGTCT CGAGGCTGAT CCCGCGCGGA CCGAACAATC CGCTCGAGCC GCCCGCTAGC
GGCTCGGGCG GCACGGGTAC GGAAACGGGC ATCCAGCCTC AATACGGCGT GCCCTTCGGC
GTGACGTTAA ATCCGTTTCT GTCGCCCGTC GGCCTGCCTT GCAAGCAACC GGCATGGGGC
TACGTCGCCG CGCTCGATCT GAAGACGAAC CAGGTGGTGT GGAAGAAGCG CATCGGCACC
GTGCGCGATA GCGCGCCCGT TCCCCTGCCG TTCAAGATGG GCATGCCGAT GCTCGGCGGT
CCAATGACGA CAGCCGGACA TGTGTTCTTC ATCGGAGCGA CGGCCGACAA CTACCTGCGC
GCGTACAGCA CCGACACGGG CGAAGAACTA TGGCGCGCGA GGCTTCCCGC CGGCGGCCAG
GCCACGCCGA TGACCTACGA AGCGAACGGC AAACAATATG TGGTGATCGC GGCGGGCGGA
CATGGTTCGT TCGGCACGAA GCTCGGCGAT TATGTGATCG CCTATGCGCT GCCGAACAAG
TGA
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| Protein sequence | MKDESKAGTP SLGIGRWLSV LFAVLSGLYL LIGGVWLVAI GGSPYYIVAA IILLVVAWLI
YRGTGLALLL YALLLIGTVI WAVFEAGFDF WALAPRIDIL VLFGIWLLLP FVYRRLDASA
RRGAAALAVC LVLTGIALAY AAFNDPQELN GKVSQNSGVS PTQPDSHPGD WTAYGRTQAG
TRYSPLAQIN QDNAKDLQVA WTFQTGDKKG PNDPVEITNE VTPLKVGALL YLCSPHQILF
ALDAATGKEK WRFDPGLKPD PSFQHVTCRG VSYHETTAAA AAKDAAAQSA LPACSRRVIL
PVNDGHLFEL DAATGQRCTG FGNNGDLDLQ HLQPVKTPGQ YEPTSPPVVT DKIIVMAGAV
TDNYSNHEPS GVIRGFDVES GRLVWAFDPG SDTPNTIPDD QHAYTVNSPN SWAPAAYDSK
LDLVYLPMGV KTPDIWGGDR TPQYERYASG LLALHASTGK LAWFYQTVHH DLWDMDLPAQ
PTIADITDRN GNIVPAIYTP AKTGNIFVLD RRTGTPIVPA PEQPVPQGAA KGDHVSPTQP
FSQLTFRPQK NLTDADMWGA TMYDQLACRV MFHRLRYEGT FTPPSEQGTL VFPGNLGMFE
WGGLAVDTDR QLAIANPIAL PFVSRLIPRG PNNPLEPPAS GSGGTGTETG IQPQYGVPFG
VTLNPFLSPV GLPCKQPAWG YVAALDLKTN QVVWKKRIGT VRDSAPVPLP FKMGMPMLGG
PMTTAGHVFF IGATADNYLR AYSTDTGEEL WRARLPAGGQ ATPMTYEANG KQYVVIAAGG
HGSFGTKLGD YVIAYALPNK
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