Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5527 |
Symbol | |
ID | 6247010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2679883 |
End bp | 2680665 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642597246 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001861649 |
Protein GI | 186474307 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.711158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0192619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGC AAAACAAAGT CGCGCTCGTG ACGGGCGCAG CAAGCGGCAT CGGCGAACAA TGCGCGCGCA AGCTCGCGAG CCTCGGCGCA GCCGTAGCGA TCGCCGACCT GAATCTGGAT AACGCGCAGA AAGTCGCGTC GAGCATCGTC GAAGCGGGCG GCAAGGCAAT TGCCGTTGCG ATGGACGTGA CGAACGAAGA AGCGGTCAAT GCGGGCATCG AGCGCACGGT AAAAGAACTC GGCAGCATCG ACGTGCTCGT GTCGAACGCG GGTATTCAGA TCGTCGCGCC GATCGAAGCG TACGCATTCG CCGACTGGAA GAAGATGCTC GCGATTCATC TGGACGGTGC GTTCCTCACT ACCAAGGCTG CCATCAGGCA CATGTACGAC AGCGATCGCG GCGGCTCGAT CGTCTATATG GGCTCGGTGC ACTCGCACGA AGCGTCGAAG CTGAAATCCG CCTACGTCAC CGCGAAGCAC GGCCTGCTCG GCCTCGCCCG CGTGGTCGCA AAGGAAGGCG GTCCGCGCGG CGTGCGCGCC AACGTCGTGT GCCCCGGCTT CGTGCGCACG CCGCTCGTCG ACAAGCAGAT TCCCGAGCAG GCAAAGGCGC TCGGCATCAG CGAAGAAGAA GTCGTGAAGA ACGTGATGCT AAAGGAAACC GTCGACGGCG AATTCACGAC GGTCGATGAC GTCGCCAACA CCGTTGCCTT CCTCGCGGGC TTCGAATCGT CGGCGTTGAC TGGTCAATCG GTGATCGTCA GCCACGGCTG GTCGATGAAA TAA
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Protein sequence | MALQNKVALV TGAASGIGEQ CARKLASLGA AVAIADLNLD NAQKVASSIV EAGGKAIAVA MDVTNEEAVN AGIERTVKEL GSIDVLVSNA GIQIVAPIEA YAFADWKKML AIHLDGAFLT TKAAIRHMYD SDRGGSIVYM GSVHSHEASK LKSAYVTAKH GLLGLARVVA KEGGPRGVRA NVVCPGFVRT PLVDKQIPEQ AKALGISEEE VVKNVMLKET VDGEFTTVDD VANTVAFLAG FESSALTGQS VIVSHGWSMK
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