| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5518 |
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| Symbol | |
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| ID | 6247001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2672194 |
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| End bp | 2673162 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597237 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001861640 |
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| Protein GI | 186474298 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.40732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0614119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG CCACGCGTCT GATCGCCGGC CTGCTCGTCG GAGCGGCGCT CACCGTCGCT
GCCAGCGTCA ACAGCTTTGC CGGGGACAAG CAGATCACCT TGGGCTTTTC GCAGGTCGGT
GCAGAAAGCG CATGGCGCAC TGCGAATACC GTATCGGTGA AAACCTCAGC AAAGGATGCC
GGCATCAACC TGAAGTTCTC GGACGCGCAG CAGAAGCAGG AAAACCAGAT CAAGGCAATC
CGCTCGTTCA TCGCGCAGAA GGTGGACGTG ATCGCGTTCT CGCCCGTCGT CGAGTCCGGC
TGGGAACCCG TGCTGACGGA GGCGAAGAAC GCGAAGATCC CCGTCATTCT CACCGACCGT
TCCATCGACG TGAAAGATAC CTCGCTGTAC GTGACGATGA TCGGCTCGGA CTTCCTCGAA
GAAGGCCGCC GCGCAGGACG CTGGCTCGAA GAGCGCTACA AGAACGAAGC GGGCCCGATC
AACATCGCCG AGCTGCAGGG CACGGTCGGT TCGGCGCCTG CCAACGACCG TCATGCGGGC
CTGATGGAAG TGATCAAGAA CGATCCGAAG TTCAAGATCA TCGCGTCGCA AAGCGGCGAC
TTCACGCTCG CGGGAGGCAA GCAGGTGATG GAGGCGTTCG CGAAGACCTA CGGCAAGCAG
ATCAACGTCG TCTACGCGCA TAACGACGAC ATGGCGCTCG GCGCGATCCA GGCGATGGAA
GAAGCGGGCA TCAAGCCCGG CAAGGACGTG AGCGTCGTGT CGTTCGACGC GACCAAGGGC
GGCTTCGAAG CGATGATCGC CGGCAAGATC AACGTCGATG TCGAGTGCAG CCCGCTGCTC
GGGCCGCAAC TGATGACGGC CGTCAAGGAC GTGGTCGCGG GCAAGCAGCT GCCCAAGCGC
ATCGTGACCA ACGAGACCGT GTTCCCGATG AGCGTCGCCG CGCAGATTCT GCCGCAGCGC
AAGTACTGA
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| Protein sequence | MKVATRLIAG LLVGAALTVA ASVNSFAGDK QITLGFSQVG AESAWRTANT VSVKTSAKDA
GINLKFSDAQ QKQENQIKAI RSFIAQKVDV IAFSPVVESG WEPVLTEAKN AKIPVILTDR
SIDVKDTSLY VTMIGSDFLE EGRRAGRWLE ERYKNEAGPI NIAELQGTVG SAPANDRHAG
LMEVIKNDPK FKIIASQSGD FTLAGGKQVM EAFAKTYGKQ INVVYAHNDD MALGAIQAME
EAGIKPGKDV SVVSFDATKG GFEAMIAGKI NVDVECSPLL GPQLMTAVKD VVAGKQLPKR
IVTNETVFPM SVAAQILPQR KY
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