Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5503 |
Symbol | |
ID | 6246987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2654475 |
End bp | 2655812 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642597223 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001861626 |
Protein GI | 186474284 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00522591 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCTT GGCAGTCGAA TCGCGCATCT GATTTCGGCG CAGGCTTCGG TGGATCGGTT GGAGAAGACG GGCCGGCCCA AGACGGGCCG GCCCAAAAAC GGCCGCTGGC ATCACGCTTT GCGCTCGCGG CGGCATTGGT GTCCGCCTTG TCCCTGACCG CCTGTAAAAA AGCGCCCACC GAACCCCCGC GCCCGACTGT CGAAGTGACG GTGGTGACGG TTGCGCAGAA GGAAACGCCC GTCGACTTCG AGTTCACCGC GCAGACGCAG AGTTCGCGCG AAGTCGAAAT CCGCGCGCGC GTCGACGGCT TTCTCGAGCG GCGTCTGTAC GACGAAGGCG CGCTGGTCAA GGAAGGCCAG GTGCTGTTCG TGATAGACCG CAAGCCCTTC GAAGCCGCGC TGCAATCGGC CAGGGGCGTG CTCGCGCAGC AGCAGGCGCG CCTGCTCGTC ACCAGACAGA ACCTCGCGCG CGTCGTGCCG CTCGCCGCGC AGAACGCGCT GAGCAAGAAG GACCTGGACG ACGCCACCGG CAACGAGAAG GAAGCCGAAG CCGCCGTGAT CGCCGCGCAG GGCGAGGTGC GCACGGCCGA ACTGAACCTG AGCTACTGCA CGATCCGCTC GCCGCTCAAG GGGCTGTCGA GCTTCGCGCG CGTGCAGGAC GGCAGCTACG TCACGCCGAC GCAATCGGGC CTGCTGACGT ACGTCTACCA GCTCGATCCG ATGTGGGTGA ACTTCAGCAT CTCCGAGAAC GAACTGCTGC GCTACCGCGA GCAGATCGCC AAGGGCCTGC TGCGCTTTCC CGCCGACAAC CGGTTCGACG TGACCGTGAT CCAGGCCGAC GGCTCGGTCT ATCCGCAAAA AGGCCGTATC GATTTCACGA ACCCCGCGTT CAGCCAGCAG ACGGGCACCT TCCTCGTGCG CGCGACCTTC GCCAATCCGG ACGGCACGCT GCGCCCGGGC CAGTTCGTGC GCGCGAAAGT GTCGGGCGCG GTGCGCCCCA ACGCGATCCT CGTGCCGCAG CGCGCGGTGC TGCAGGGCGC GAAGAGCCAC TTCGTGTGGG TGCTCGACCA GGACGCGAAG CCGCATCAGC GTGTGGTCGA TGTCGGCGAC TGGCACGGCG ACGACTGGTT CGTCAACGAA GGCCTGAAGC CGGGCGAGCG CGTGGTGGTC GACGGCGCGA TCCGCGTGTC GTCGGATGCG CAGATCAAGG TGGTGAGCGC GCCGCCGGGC TCGGGCGCGC CCGGCACGCC CGCGGCCCCT GCGTCGGCGC CCGCGGCGGC GGCGTCCGTG CCCGCGGCGA CCGTGGCCGG GACGCAGGCG CGTCCGGCCA GCCCCTGA
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Protein sequence | MASWQSNRAS DFGAGFGGSV GEDGPAQDGP AQKRPLASRF ALAAALVSAL SLTACKKAPT EPPRPTVEVT VVTVAQKETP VDFEFTAQTQ SSREVEIRAR VDGFLERRLY DEGALVKEGQ VLFVIDRKPF EAALQSARGV LAQQQARLLV TRQNLARVVP LAAQNALSKK DLDDATGNEK EAEAAVIAAQ GEVRTAELNL SYCTIRSPLK GLSSFARVQD GSYVTPTQSG LLTYVYQLDP MWVNFSISEN ELLRYREQIA KGLLRFPADN RFDVTVIQAD GSVYPQKGRI DFTNPAFSQQ TGTFLVRATF ANPDGTLRPG QFVRAKVSGA VRPNAILVPQ RAVLQGAKSH FVWVLDQDAK PHQRVVDVGD WHGDDWFVNE GLKPGERVVV DGAIRVSSDA QIKVVSAPPG SGAPGTPAAP ASAPAAAASV PAATVAGTQA RPASP
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