Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5497 |
Symbol | |
ID | 6246981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 2647064 |
End bp | 2649448 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642597217 |
Product | putative phosphoketolase |
Protein accession | YP_001861620 |
Protein GI | 186474278 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.59258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACA CCCGCCTGCA ACCCACGCCG TTGCAAGCCG ATGAACTGCG CAACATGGAC GGCTACTGGC GGGCCTGCAA TTACCTGGCC GCCGGCATGA TTTACCTGCG CGAGAATCCG CTGCTGCGCG AGCCGCTGCA GGCCGGACAT ATCAAGCGGC GCCTGCTGGG ACACTGGGGC TCCGATCCGG GACAAAGCTT CGTGCTCGTG CATCTGAACC GGGTCATCAA GCAGCGCGAC CTGAACGTGA TTTTCCTCTC GGGGCCGGGC CACGGGGCGC CCGCCTCGCT TGCGCACAGC TATCTGGAAG GACGCTATTC GGAGATCTAC CCCGATCGGG GCGAGTCGGA AGAGGGCATG GCGCGTCTGT TCAAGCTCTT TTCGTTTCCT GGCGGCATCG GCTCGCATTG CACACCCGAG ACGCCCGGCT CGATTCATGA AGGCGGCGAA CTGGGCTACA GTCTGTCGCA TGGTTATGGC GCGGCATTCG ACAACCCCGA TCTTATCGTC ACCGTGATGA TCGGCGATGG CGAGGCCGAG ACGGGGCCGC TGGCCACAGC GTGGCACTCG AACAAATTCC TGAATCCGGC GCGCGACGGC GCCGTGTTGC CCGTGCTGCA TTTGAACGGC TACAAGATCG CGAATCCGAC GATCCTCGCC CGCATTCCGC ATGAAGAGCT GGAAGCACTG TTCAATGGTT ATGGCTACAA GCCTTGGTTC GTCGAAGGCG ACGATCCCGA CACGATGCAT CAGCAGATGG CGGCCACGCT CGATCAATGC CTCGACGAAA TTCATGCGAT CCAGCAACGC GCGCGTCAAG GAGGCGATCT GCAACGGCCG CGCTGGCCGA TGATCGTTCT CAGAACGCCG AAGGGCTGGA CAGGGCCGCG CGAATTCGGC GGACACAGGA TTGAAGGCTC GTGGCGCGCG CATCAGGTGC CTATCGCCGA TCCCGCGAGC AACGAGCAGA GCCTCAAGCG GGTCGAGGAA TGGTTGCGCA GCTATCGCCC GGAAGAACTA TTCGACGAAT CAGGGCGGCT GGTCCGGGAG TTGCGTGCGC TCGCACCCGA AGGACCGCGC CGCATCAGCG CCAATCCGCA CGCGAATGGC GGGGCGCTGT GCAAGGCGCT CGATCTGCCG GCCTTTGCCG ACTATGCGGT CGACGTCGTC ACGCCCGCCA CACGCTATCT GTCGCCTACC GATGTGCTCG GGCAGTTTCT TTGCGACGTG ATGCGTCGGA ACATGACAAG CTTTCGCGTG TTCGGTCCGG ACGAAACGTC CAGCAACAAG CTCACGGCGA TTTACGAAGC TTCGCAGAAG ACGTGGCTCG CGGAGGTCGT CGAATCGGAC GGCGACGGCG GTTACCTCTC TGCCGATGGC CGCGTGATGG AAATGCTCAG CGAGCACACA CTGGAAGGCT GGCTGGAAGG CTATACGCTG ACGGGCCGGC ATGGCCTGTT CGCCACGTAC GAAGCGTTCG TGCATGTGAT CGATTCGATG TTCAACCAGC ACGCCAAATG GCTCGAAAAG GCGAAGCGCG AATTGCGCTG GCGCCAGCCC GTGCCTTCGC TGAATCTGCT GATTACGTCG CTGGTGTGGC GGCAGGATCA TAACGGCTTC ACGCATCAGG ACCCGGGCTT TCTCGACGTC GTGACGAACA AGAGCCCCGA CGTGGTGCGC ATCTATCTGC CGCCCGACGC GAACTGCCTG TTGAGCGTCG CCGATCATTG CCTGCGTTCG CGCGATTACG TGAACGTGAT CGTCGCCGAC AAGCAGCCTC ATTTGCAGTA TCTGGACATG CCGTCGGCCA TCACGCATTG CACGAAAGGC ATCGGCATCT GGGACTGGGC GTCGACGGAT CAGGACCACG AGCCCGACGT CGTGATGGCG AGCGCAGGCG ACATCCCGAC CATGGAAGCG CTGGCTGCCG TCGAAATCCT CAAGGCGCTG TTCCCCGACC TGAAGATCCG CTTCGTGAAC GTGGTCGATC TGTTCCGGCT AATGCCGGCC GCCGATCATC CGCATGGCCT GTCGACGCGC GATTTCGATT CGCTCTTCAC GACAGACAAG CCCGTGATCT TCAACTTCCA TTCGTACGCT TCGCTTGTCC ACAAGCTCAC GTATCGCCGC ACGAATCACG AGAACATACA CGTGCACGGC TACGCGGAGA AGGGCAACAT CAATACGCCG CTCGAGCTTG CGATCATCAA CGGCATCGAC CGCTTCTCGC TCGCAATCGA CGTGATCGAT CGCGTGCCGT CGCTACGGGG CGTCGGCGAT CACGCGAAGG AACGCCTGCG CGACAAGCGG ATCGAGCACC TCCACTACGC GCACACGGAG GGCATTGACT CCGAAGAGAT TCGCGAGTGG ACGTGGAAGG GCTAG
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Protein sequence | MDDTRLQPTP LQADELRNMD GYWRACNYLA AGMIYLRENP LLREPLQAGH IKRRLLGHWG SDPGQSFVLV HLNRVIKQRD LNVIFLSGPG HGAPASLAHS YLEGRYSEIY PDRGESEEGM ARLFKLFSFP GGIGSHCTPE TPGSIHEGGE LGYSLSHGYG AAFDNPDLIV TVMIGDGEAE TGPLATAWHS NKFLNPARDG AVLPVLHLNG YKIANPTILA RIPHEELEAL FNGYGYKPWF VEGDDPDTMH QQMAATLDQC LDEIHAIQQR ARQGGDLQRP RWPMIVLRTP KGWTGPREFG GHRIEGSWRA HQVPIADPAS NEQSLKRVEE WLRSYRPEEL FDESGRLVRE LRALAPEGPR RISANPHANG GALCKALDLP AFADYAVDVV TPATRYLSPT DVLGQFLCDV MRRNMTSFRV FGPDETSSNK LTAIYEASQK TWLAEVVESD GDGGYLSADG RVMEMLSEHT LEGWLEGYTL TGRHGLFATY EAFVHVIDSM FNQHAKWLEK AKRELRWRQP VPSLNLLITS LVWRQDHNGF THQDPGFLDV VTNKSPDVVR IYLPPDANCL LSVADHCLRS RDYVNVIVAD KQPHLQYLDM PSAITHCTKG IGIWDWASTD QDHEPDVVMA SAGDIPTMEA LAAVEILKAL FPDLKIRFVN VVDLFRLMPA ADHPHGLSTR DFDSLFTTDK PVIFNFHSYA SLVHKLTYRR TNHENIHVHG YAEKGNINTP LELAIINGID RFSLAIDVID RVPSLRGVGD HAKERLRDKR IEHLHYAHTE GIDSEEIREW TWKG
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