Gene Bphy_5469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5469 
Symbol 
ID6246953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2617213 
End bp2617860 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID642597189 
ProductXRE family transcriptional regulator 
Protein accessionYP_001861592 
Protein GI186474250 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0381278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.011752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAT CCGTCACGCG CAACGCGCCC GCGCTCACCA CCAGGGCGTC CGCCCAGATC 
GATCATCAGG CGGTCGGCGC GCGCCTGCGC GACGCGCGCA AAGCGCGCGG GCTGACGCTG
ATGCAGTTGT CGGAGCAGTC GGGTATCGCC GTGTCGACGA TCTCGAAGGC GGAGCGCGGC
GATATCGCGC TGACCTACGA CAAGTTCGCG GCGCTCGCGC ACGCGCTGCA GCTCGAATTC
GACGCGATTT TCGGGCGCGC GAAGCGTTCG GGTTCGAGTC CCATCGTGCC GACCTTCACG
GCGTCGGGCG AGCAGATGAT CTACGACACG CCCAACTACG AGTACGGGAT GCTCGCGAAC
GACCTGACGG GCAAGCGCAT GGTGCCGATG CGCGCGCACG TGCGGGCGCG CAAGCTAAGC
GACTTTCCCG ACTACATCCG GCACAGCGGC GAGGAGTTCG TGTTCCTGCT GAACGGCTCG
CTCGAACTGC GCTTCGAAAC GGGCGCGGTG TTTCAACTGA AACCGGGCGA CAGCCTGTAC
TTCGACAGCG CCGTCGGCCA TGTGTATCTG AGCACGGGCA AAAAGCCCGC CGAAGTGCTC
GTGTGCTGCG TGGACGCGGA TGCGCAGCGG CCCGCCGACG CGATCTGA
 
Protein sequence
MARSVTRNAP ALTTRASAQI DHQAVGARLR DARKARGLTL MQLSEQSGIA VSTISKAERG 
DIALTYDKFA ALAHALQLEF DAIFGRAKRS GSSPIVPTFT ASGEQMIYDT PNYEYGMLAN
DLTGKRMVPM RAHVRARKLS DFPDYIRHSG EEFVFLLNGS LELRFETGAV FQLKPGDSLY
FDSAVGHVYL STGKKPAEVL VCCVDADAQR PADAI