| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5463 |
|---|
| Symbol | |
|---|
| ID | 6246947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2611320 |
|---|
| End bp | 2611841 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642597183 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001861586 |
|---|
| Protein GI | 186474244 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0475431 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAATC TCCACCTATT GCGCCGATCA GTCAGCAGCA CGCTGGTCGT CGCCGCGCGC
CGCTGGCGCC GCACGAGCCA TAGCGTGTTG TCTGCCTACA ACGTGTCGGA GGCGTGTGCG
GGGCCGCTGC TCATGGCCAA CCGGCTCGGC GAGGCGGTGC GTCAGGTGAC GCTGGCGGAA
CATGTGGGCA TCGAAGGCCC GTCGCTGGTT CGGCTGCTCG ATCAGTTGTG CGCGGCGGGT
CTCGTGCGCC GCGACGAGGA CCCCGACGAC AGGCGCGCGA AGACCATTTC CCTCACCGAC
GAAGGCCGCG CCGTCACCGC GCGAATGGAA GAACGGCTGA TGGAACTGCG AGCCCGCGTG
CTCAAGGGCG TGAGCCGCGA AGACCTGGAG ACGACGCTGC GGGTGCTCAA TGCCTTCAAT
GCGTCGCTCG ATGCTACAGT CATGGCCGAC AGCGACACAT CCGGCGAGCC AGCCGCCCCC
GTCCCGTCCG GCGGCAAGCC ACGCACAACC GGCAAGGCAT AA
|
|---|
| Protein sequence | MINLHLLRRS VSSTLVVAAR RWRRTSHSVL SAYNVSEACA GPLLMANRLG EAVRQVTLAE
HVGIEGPSLV RLLDQLCAAG LVRRDEDPDD RRAKTISLTD EGRAVTARME ERLMELRARV
LKGVSREDLE TTLRVLNAFN ASLDATVMAD SDTSGEPAAP VPSGGKPRTT GKA
|
|---|
| |