Gene Bphy_5462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5462 
Symbol 
ID6246946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2609158 
End bp2611314 
Gene Length2157 bp 
Protein Length718 aa 
Translation table11 
GC content67% 
IMG OID642597182 
Productfusaric acid resistance protein region 
Protein accessionYP_001861585 
Protein GI186474243 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0737125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTATC CCTCAGTCCG CGACTGGCTG TTTTCCGCCA AGACGTTCGC GGCGGCGATG 
ATTGCGCTGT ATATCGGCCT TGCGCTCGAA CTGCCCCGCC CTTACTGGGC GATGGCGACC
GTCTATATCG TCTCGAATCC GTTCGTCGGC GCGACGCGCT CGAAGGCGCT GTACCGCGCG
CTCGGCACTG TGCTCGGCGC GTCGGGCGCC GTGTTGATCG TGCCGCCGTT CGTCGAGTCG
CCATTCCTGT TCAGCGTGAT CGTGGCGTCG TGGACGGGCA CGCTGCTGTA TCTGTCGCTC
AACGACCGCA CCGCGCGCAG CTATGTGTTC CTGCTCGCGG GCTACACGCT GCCGCTGATC
GCGCTGCCCG CCGTCACCAA TCCCACCACC GTGTTCGATC TCGCCATCGC GCGCACGGAA
GAGATTACGC TGGGCATCGT CGTCGCGAGC ATCGTCGGCA GTGTGGTGTT TCCGCTCCGC
CTTGCGCCGA CCGTGATCGA GCGCACCGAC GCCTGGTTTC GCGACGCCGC GTTCTACGCG
AGCGAAACGC TGTCTGGGCA TATCGCGGGC GCGTCGATCT CGGCCTCGCG CCAGCGGCTC
GCGGCCACCG TCAACGGTCT TGAATTCCTG CTGAGCCAGC TGACCTACGA CCACACGCGT
CCCGACATCG TGCGCCGCGC GCGCGCATTG CAAGGCCGCA TGCAGATTTT CCTGCCGCTG
ATCTCGTCGA TGGCCGATCC GCTGATCGAG CTGGTCCGCG AGCGCGGCGG GCATCCGCCC
GAACTCGAGA CGCTGCTGGC CGACGTCGCC AGGTGGATCA AGGCGCCGAC ACTCGACGCG
AAGCACGCCG ACGAGCCCGA CCATGAAGCG CAAGCGCTGC GCGGCCGCGT CGACATGTTG
AAGCCGTCGG CGCAGGCGCT CGCGAGCTGG GAAGGCGCGC TGCTGTCGAA CGCGCTGTGG
CGCCTGGGAC AGGTGATCGA CGTGTGGCGC GACATCCGCT GCCTGCGCGC AGCCATCGTC
CACGAAACGG TCTTGTGGCG GCCGCACTTT CGCCACTGGC GGCTGGGCGG CACCGAGCGC
TATTTCGACT ACGGCATGAT GTTGTTCTCG ACGGCGTCGG CCGTCTGCGC GATTGTCGTC
GCATCCGGAT TGTGGATTAC GTCGGGCTGG AACGACGGCG CGTCGGCCGT GGCGCTCGCG
GCCGTGTCGA TCTGCTTCTT CGCCGCGCTC GACGAACCAG CGCCCGCTGT CTTCAAGTTC
TTCCTCGCGA CCTGCGCGAG CGTCGTGCTG GCCGGGGTTT ACGTGTTCGT CGTGTTGCCG
CTGGTGCACG ATTTCGCGAT GCTGGTCGTG ATTTTCGCCG GACCGTTCCT GATCATCGGC
ACGCTCATTC CGCGCCCGCA ATTCACGCTC GTGACGCTGC TCACTGCCGT CAACACAGCA
ACCTTCATCA GCATCCAGAG CGCCTACGAA GCCGACTTCT TCGTGTTTCT CAACAGCAAT
CTGGCGGGTG TCGCGGGCTT GCTGTTCGCT TTTGTCTGGA CGCGCGCCAC GCGTCCGTTC
GGCGCGGAGC TGGCCGCCGA GCGGCTCACG CGTTCCGCAT GGGCCGATGT CGTGGTGAGC
GCCTCGACGG CCGCGATCGA AGACCAGCGC AATCTGTACT CGCGCATGCT CGACCGGCTG
ATGCAGCTGC TGCCGCGCCA TGCCGCGAGC GATTCGCACC GCCATCCTTC GATCGAAAGC
TTCCGCGACT TCCGCGTCGC ACTCAATGCG CTGGATCTGC GCCGTACGCG CCGAAAGCTG
ACGGGCGACC TGCAAGCCGC CATCGATGAC GTGCTGGTCG GCGTGCGGCA GTATTTCGAG
CAATGCCTCG CGCACCGCTC ACGGCGGCCG GTGCCCGCCA CGCTGATCGA AGCGATCGAT
GCCGCCGTCG CGCGCGTGGC GACGCACAGC ATCGCGCAGG GACAGCCCGG CTCGCAGCAG
CAGCCGGAAC AACCCGCGCA AAGGCGGGTG GAACAGGCCC TCGCCCCCGC GGCGCCTTAC
AGCGAGCGCT GGTTGCGCGA CACGCTCAAC GCGCTGGTCG GCATGCGCCT GTCGCTGTTC
CCGCCGCATC CTGCACCCGG CAGCCATGTG CCGCCCGAAC CGGAGACGGC AGCGTGA
 
Protein sequence
MVYPSVRDWL FSAKTFAAAM IALYIGLALE LPRPYWAMAT VYIVSNPFVG ATRSKALYRA 
LGTVLGASGA VLIVPPFVES PFLFSVIVAS WTGTLLYLSL NDRTARSYVF LLAGYTLPLI
ALPAVTNPTT VFDLAIARTE EITLGIVVAS IVGSVVFPLR LAPTVIERTD AWFRDAAFYA
SETLSGHIAG ASISASRQRL AATVNGLEFL LSQLTYDHTR PDIVRRARAL QGRMQIFLPL
ISSMADPLIE LVRERGGHPP ELETLLADVA RWIKAPTLDA KHADEPDHEA QALRGRVDML
KPSAQALASW EGALLSNALW RLGQVIDVWR DIRCLRAAIV HETVLWRPHF RHWRLGGTER
YFDYGMMLFS TASAVCAIVV ASGLWITSGW NDGASAVALA AVSICFFAAL DEPAPAVFKF
FLATCASVVL AGVYVFVVLP LVHDFAMLVV IFAGPFLIIG TLIPRPQFTL VTLLTAVNTA
TFISIQSAYE ADFFVFLNSN LAGVAGLLFA FVWTRATRPF GAELAAERLT RSAWADVVVS
ASTAAIEDQR NLYSRMLDRL MQLLPRHAAS DSHRHPSIES FRDFRVALNA LDLRRTRRKL
TGDLQAAIDD VLVGVRQYFE QCLAHRSRRP VPATLIEAID AAVARVATHS IAQGQPGSQQ
QPEQPAQRRV EQALAPAAPY SERWLRDTLN ALVGMRLSLF PPHPAPGSHV PPEPETAA