| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5456 |
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| Symbol | |
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| ID | 6246940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2601950 |
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| End bp | 2604193 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597176 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001861579 |
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| Protein GI | 186474237 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.897377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0127926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACA AGCAACCTAC GATCATCTAC ACCCTGACCG ACGAAGCCCC GCTGCTCGCG
ACGAGTGCCT TTCTGCCGAT CATCCGTACG TTTACCTCTC CGGCTGGCGT CAATGTCGAG
ACCAGCGACA TTTCGGTGGC AAGCCGTATC CTCGGCGAAT TCCCGGAATT TCTGACGGAA
GAGCAGCGCG TGCCGGACAA CCTGGCCGAG CTCGGCCGCC TCACGCAAGA CCCGGACACG
AACATCATCA AGCTGCCGAA CATTTCGGCG TCGGTGTTCC AGCTGGTCAG CGCGATCAAG
GAACTGCAGT CGAAGGGCTT CAAGGTGCCG GACTATCCGG AAGACCCGAA GAACGAGGAA
GAAAAGGCGA TCCAGAAGCG TTACTCGAAG TGCCTCGGCT CGGCCGTGAA CCCGGTTCTG
CGCGAAGGCA ACTCGGACCG CCGTGCGCCC GCCGCCGTGA AGAACTACGC GAAGAAGCAT
CCGCATAGCA TGGCCGAGTG GAGCATGGCG TCGCGCACCC ACGTTGCGCA CATGAAGCAT
GGCGACTTCT ACCACGGCGA AAAGTCGATC ACCAACGACA AGGCACGTGA AGTTCGCATG
GAACTCGTCA CGAAGCGCGG CGAGACGATC GTGCTGAAGC CGAAGGTTTC GCTGCAGGAA
GGCGAGATCG TCGACAGCAT GTTCATGAGC AAGAAGGCGC TGGTCGAATT CTACGAAGAC
CAGATGGAAG ACGCGCACAA GACGGGCGTG ATGCTGTCTC TGCACGTGAA GGCGACGATG
ATGAAGGTCT CGCACCCGAT CGTCTTCGGT CATGCCGTCA AGGTGTTCTA CAAGGACGCA
TTCGCGAAGC ACCAGAAGCT GTTCGACGAA CTCGGCGTGA ACGTCAACAA CGGCCTCGTC
GACCTGTACA CGAAGATCGA GGCGCTGCCG GAATCGCAGC GCGAAGAGGT GATCCGCGAC
ATGCACGCAT GCCACGAGCA TCGACCGGCG CTGGCGATGG TCGATTCGGC GAAGGGCATC
TCGAACCTGC ATGCACCGAA CGATGTGATC GTCGACGCGT CGATGCCCGC GATGATCCGC
GCAGGCGGCA AGATGTGGGG CGCCGACGGC CGTCCCGCCG ACACGAAGTG CCTGATTCCC
GAAAGCACGT TCGCGCGCAT CTACCAGGAA ATCATCAACT TCTGCAAGAC CAACGGCGCA
TTCGATCCGC GCACGATGGG CACGGTGCCG AACGTCGGCC TGATGGCGCA GAAGGCGGAA
GAGTACGGCT CGCACGACAA GACGTTCGAG ATCAAGGAAG ACGGCGAAGC ACGCATCGTC
GACAACGCGA CGGGTGAAGT GCTGACGGCG CTCACGCAGC CGGTCGAGCA GGGCGACATC
TGGCGCATGT GCCTCGTGAA GGACGCACCG ATCCGCGACT GGGTCAAGCT TGCTGTCACG
CGCGCGCGCA ACTCGGGCAC GCCCGCCGTC TTCTGGCTCG ACCCGTACCG TCCGCATGAA
AACGAACTGA TCAAGAAGGT GCAGACGTAC CTGAAGGATC ACGACACGAA CGGCCTCGAC
ATCCAGATCA TGTCGCAGGT TCGCGCAATG CGTTACACGC TGGAGCGTGT GATCCGCGGT
CTGGACACCA TCTCGGTGAC GGGCAACATC CTGCGCGACT ACCTGACCGA CCTGTTCCCG
ATCATGGAAC TGGGCACGTC GGCGAAGATG CTGTCGATCG TACCGCTGAT GGCGGGCGGC
GGCATGTACG AGACGGGTGC GGGCGGTTCG GCACCGAAGC ACGTCAAGCA GCTGGTCGAA
GAAAACCACC TGCGCTGGGA TTCGCTGGGC GAGTTCCTCG CGCTGGCCGT GTCGCTGGAA
GAGCTGGGCA TCAAGACGGG CAACAACAAG GCGAAGGTGC TGGCGAAGAC GCTCGACGCT
GCGACGGGCA AGCTGCTCGA CAACAACAGG AGCCCTTCGC CGAAGACGGG TGCGCTCGAC
AATCGCGGCA GCCAGTTCTA CCTCGCCATG TACTGGGCGC AGGAACTGGC CGCGCAGACG
GACGACGCGG AACTCGCCGC GAAGTTCGGC CCGCTCGCCA AGGTATTGAC TGACAACGAA
GCGACGATCG TTGGCGAACT GACGGACGTG CAGGGCAAGG AAGTCGACAT CGGCGGTTAT
TACAAGCCGG ACTTCGCGAA GCTCGAAGCG GTGATGCGTC CGAGCAAGAC GCTCAACGCC
GCGCTGGCTG CCGTGACGGC GTAA
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| Protein sequence | MSNKQPTIIY TLTDEAPLLA TSAFLPIIRT FTSPAGVNVE TSDISVASRI LGEFPEFLTE
EQRVPDNLAE LGRLTQDPDT NIIKLPNISA SVFQLVSAIK ELQSKGFKVP DYPEDPKNEE
EKAIQKRYSK CLGSAVNPVL REGNSDRRAP AAVKNYAKKH PHSMAEWSMA SRTHVAHMKH
GDFYHGEKSI TNDKAREVRM ELVTKRGETI VLKPKVSLQE GEIVDSMFMS KKALVEFYED
QMEDAHKTGV MLSLHVKATM MKVSHPIVFG HAVKVFYKDA FAKHQKLFDE LGVNVNNGLV
DLYTKIEALP ESQREEVIRD MHACHEHRPA LAMVDSAKGI SNLHAPNDVI VDASMPAMIR
AGGKMWGADG RPADTKCLIP ESTFARIYQE IINFCKTNGA FDPRTMGTVP NVGLMAQKAE
EYGSHDKTFE IKEDGEARIV DNATGEVLTA LTQPVEQGDI WRMCLVKDAP IRDWVKLAVT
RARNSGTPAV FWLDPYRPHE NELIKKVQTY LKDHDTNGLD IQIMSQVRAM RYTLERVIRG
LDTISVTGNI LRDYLTDLFP IMELGTSAKM LSIVPLMAGG GMYETGAGGS APKHVKQLVE
ENHLRWDSLG EFLALAVSLE ELGIKTGNNK AKVLAKTLDA ATGKLLDNNR SPSPKTGALD
NRGSQFYLAM YWAQELAAQT DDAELAAKFG PLAKVLTDNE ATIVGELTDV QGKEVDIGGY
YKPDFAKLEA VMRPSKTLNA ALAAVTA
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