Gene Bphy_5454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5454 
Symbol 
ID6246938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2600226 
End bp2600936 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID642597174 
Productprotein of unknown function DUF899 thioredoxin family protein 
Protein accessionYP_001861577 
Protein GI186474235 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0299136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTG CATCTTCTCT CGTGCCCGCC GACGAGCTCG CGAAGCGCAA CGGCAGCCAC 
TTTCCGAACG AGAGCGTCGA GTATCGCCGC GCGCGCGACG CACTGCTCGC GGAGGAAATC
GAGCTTCGAC GGCATATCGA ACGCGTCGCC GAGCAGCGCA GGCGGCTGCC GCCGGGGGGC
GAGGTGACGG GCGACTATCG CTTCGTCGGC GAGGCGGGTT CTGTCGATTT CGCGGGGCTA
TTCGGCGATA AGGCGACACT CGTGATCTAC AGCTTCATGT TCGGGCCGCA GCGCGAGCGG
CCATGTCCGA TGTGCACGTC GTTGCTGGGC GCATGGGACG GCGAGGCGCG CGACATTACG
CAGCGCATCG CGCTCGCCGT GGTCGCGCGT TCGCCCATCG AGCGGCTGGT CGCGTTCAAG
GAAGAACGCG GCTGGCGCGC GCTGAAGCTG TATTCGGACG TGAACGGCGT GTACAGTCGC
GACTTCGGCG CGATCAATGA CGACGGCGGC GACGACCCCG CGTTCCACGT CTTCACGCGC
CGCGACGGCA CGATCCGGCA TTTCTATGCA TCGGAAATGG GCTTCGCGAC CGCCGATCCG
GGGCAGGATC CGCGCGGCGC GCCGGATCTG ATGCCGATGT GGACGATCTT CGACATGACG
CCCGAAGGGC GCGATCCGCA TTGGTATCCG AAGCTCGACT ACGCGCGTTG A
 
Protein sequence
MSTASSLVPA DELAKRNGSH FPNESVEYRR ARDALLAEEI ELRRHIERVA EQRRRLPPGG 
EVTGDYRFVG EAGSVDFAGL FGDKATLVIY SFMFGPQRER PCPMCTSLLG AWDGEARDIT
QRIALAVVAR SPIERLVAFK EERGWRALKL YSDVNGVYSR DFGAINDDGG DDPAFHVFTR
RDGTIRHFYA SEMGFATADP GQDPRGAPDL MPMWTIFDMT PEGRDPHWYP KLDYAR