| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5382 |
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| Symbol | |
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| ID | 6246867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2524269 |
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| End bp | 2525012 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597103 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001861506 |
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| Protein GI | 186474164 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.429427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.712878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCGA ATCTTCAAGG CAAGATTGCT TTCGTCACGG GCGGTGCACG CGGAATCGGC
GCGGCGGTGG TTCGCCGGCT TGCCCGCGAA GGTGCGACGG TCGCCTTCAC GTATCACAGC
TCGGCAGCGG GAGCGAACGA TCTCGTCGCG AGCATCGAAA AAGCGGGCGG GCGTGCCATT
GCCGTCAAGG CGGACGTAGC CGATGCCGCT GCGCTGACGA ACGCAATCAA CGAGACGGCG
CGCGAACTCG GCAAGATCGA CATCCTCGTG AACAACGCCG GTGTGCTGCG CATCGGCACG
CTGGACAGCT TCACGCTTGA AGACTTCGAT GCGACGGTGC AAGTGAACGT GCGCGCCGTG
TTCGTCGCAT CGAAGGCGGT GCTGCCGCAC ATGGGACAAG GCGGCCGGAT CATCAATATC
GGCAGCACGA ATGCCGAGCG CATGCCGTTC GCGGGCGGCG CGGCGTACGC AATGAGCAAG
TCGGCGCTGC TCGGGCTCGT GCAAGGCCTT GCGCGTGATC TCGGTCCGAA GGGCATCACG
GTTAACAACG TGGCGCCCGG CCCCGTCAAT ACCGACATGA ACCCGGAAGC GGGCGAGTTC
GGTGCATCGC TGCACAGCCT GATGGCGATC CCGCGTCACG CTACGACGGA CGAAATCGCA
GGTATGGTCG CGTATGTCGC GAGCCCGGAA GCGGCGTTCG TGACGGGCGC GAACCTGCTG
ATCGACGGCG GCTTCGCTGC GTAA
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| Protein sequence | MNSNLQGKIA FVTGGARGIG AAVVRRLARE GATVAFTYHS SAAGANDLVA SIEKAGGRAI
AVKADVADAA ALTNAINETA RELGKIDILV NNAGVLRIGT LDSFTLEDFD ATVQVNVRAV
FVASKAVLPH MGQGGRIINI GSTNAERMPF AGGAAYAMSK SALLGLVQGL ARDLGPKGIT
VNNVAPGPVN TDMNPEAGEF GASLHSLMAI PRHATTDEIA GMVAYVASPE AAFVTGANLL
IDGGFAA
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