| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5335 |
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| Symbol | |
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| ID | 6246820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2470732 |
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| End bp | 2472903 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597056 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001861459 |
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| Protein GI | 186474117 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0240771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACCG ATTCCCGCAT CACCGAGGGC TTGCCGTTTC CGCTCGGCGC GACCTGGGAC
GGCAAAGGCG TCAACTTTGC GCTCTTCTCT GCGCATGCAA CGAAAGTCGA ACTTTGTCTG
TTCGACGAGA AAGGCGAGAA GGAACTCGAG CGCATCGAGT TGCCCGAGTA CACCGACGAA
GTGTGGCACG TGCATGTGGC GGGTCTGAAG CCGGGTACCG TGTACGGCTA TCGCGTGCAT
GGTCCCTATG AACCCGAGGC GGGTCATCGC TTCAATCCGA ACAAGCTGCT ACTCGATCCG
TACGCGAAGG CGCATGTCGG GTCGTTGCGC TGGGATCCGT CGTTGTTCGG CTATATGCTC
GAAAACGAAG ACGACCTCAC GTTCGACGAA CGGGACAGCG CGGCTTTCAT GCCGAAGTGT
CAGGTGGTCG ACCAAACCTT CAACTGGACG CATCCGACGC GCATCCGCGT GCCGTGGGAC
CGCACGATCG TCTACGAGAC GCATGTGCGC GGTTACACGA AGCTGCATCC CGGCGTGCCC
GAAGCCATGC GCGGCACCTT CGACGGCCTC GCGCAAAAGC CGGTGATCGA CCATATCCGG
CGCATCGGCG CGACGACGAT CGAACTGCTG CCCGTGCACT CGTTCGTCAA CGATCAATAT
CTGCTAGACA AAGGGCTGAC GAACTACTGG GGGTACAACA CGATCGGTTT TTTCGCGGCC
GATCCGCGCT ACTTCGCACG CGGCCCCGGT GCGGTCGCCG AATTCAAGGA GATGATCGAC
CGGCTGCACG ATGCCGGTCT CGAACTGATC CTCGACGTCG TGTACAACCA TACGGCGGAG
GGCAATGAGC GCGGACCGAC GCTGTCGTTT CGCGGCATCG ACAACGCGTC GTACTACCGG
CTGATGCCCG ACGAACCACG CTATTACATC AACGACACGG GCACGGGCAA TACGCTGAAC
CTGTCGCATC CGCGCGTGCT GCAGATGGTC ACGGACAGCC TGCGCTACTG GGTGACGGAG
ATGAACGTCG ACGGCTTCCG CTTCGATCTG GCCACCATCC TTGGACGCGA GCCCTATGGT
TTCGATGAGG GCGGCGGCTT TCTCGACAGT TGCCGCCAGG ACCCCATCAT CTCCAGTGTG
AAGCTGATCG CCGAGCCGTG GGATTGCGGA CCGGGCGGCT ATCAGGTGGG CGGTTTCCCG
CCAGGCTGGG CTGAATGGAA CGATCGCTTT CGCGATACCG TGCGCTCGTT CTGGAAAGGC
GACGAAGCCT GTGCGGCCGA CCTCGCGACG CGTATGACGG CTTCGGGCGA CTTTTTCAAC
CGGCGCGGCA GACGGCCGTG GGCGAGCGTG AACTTCATCA CCGCGCATGA CGGGTTCACG
TTGAACGATC TCGTGACGTA CAACGAGCGT CACAACGAGG CGAACGGCGA GGACAACAAC
GACGGCCATA GCGACAATCG CTCGTGGAAT TGCGGCGTCG AAGGGCCGAC CGACGATCCC
GACGTGATTG CGTTACGCGA ACGGCAGAAG CGCAATCTGC TCGCGACGCT GCTGTTTTCG
CAAGGCACGC CCATGATGCT CGCGGGCGAC GAATTCGGCC GCACGCAGAA GGGCAACAAC
AACGCGTATT GCCAGGACAA CGAGATCAGC TGGGTCGACT GGGAGGGGCT CGACGACCAC
GGCCGCGCGC TCGCCGAGTT CGTGCGCAAG CTGACCACAT TGCGTCATGC GCTGCCCGTG
CTGCGGCGCA ATCGCTTTCT CACGGGTGAG ATGCGCGAGG ACATGGGCGT CAAGGACGTG
AAGTGGCTGA GTCCGGCAGG CGTCGAGTTG ACGGACGAGC AATGGGCCGA TACCGCGATG
CGCTGCTTCG GCCTCGTGAT AGACGGACGC GCGCAGGCGA GCGGCATCCG GCGTCCGGCT
TCCGATGCGA CGCTGCTGCT CGTCGTCAAT GCGTATCACG ATGTCGTCGA TTTCACGCTG
CCCGAAATTC CGGGCAGCGA TCAATGGAGT TGCATGATCG ACACGAACGC ACCGGACCGT
GACGAGTTGC CCGAATTCGA ATCGGGCGAG GCGTATCAGG TGACGGGGCG CTCGTTGCTG
CTCTTCGCGT TGCACGCGAA GGGCGAGACG AAGCGGATTT TTCAGCGGCT GGAAGAGCGG
CTAACGGAAT GA
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| Protein sequence | MPTDSRITEG LPFPLGATWD GKGVNFALFS AHATKVELCL FDEKGEKELE RIELPEYTDE
VWHVHVAGLK PGTVYGYRVH GPYEPEAGHR FNPNKLLLDP YAKAHVGSLR WDPSLFGYML
ENEDDLTFDE RDSAAFMPKC QVVDQTFNWT HPTRIRVPWD RTIVYETHVR GYTKLHPGVP
EAMRGTFDGL AQKPVIDHIR RIGATTIELL PVHSFVNDQY LLDKGLTNYW GYNTIGFFAA
DPRYFARGPG AVAEFKEMID RLHDAGLELI LDVVYNHTAE GNERGPTLSF RGIDNASYYR
LMPDEPRYYI NDTGTGNTLN LSHPRVLQMV TDSLRYWVTE MNVDGFRFDL ATILGREPYG
FDEGGGFLDS CRQDPIISSV KLIAEPWDCG PGGYQVGGFP PGWAEWNDRF RDTVRSFWKG
DEACAADLAT RMTASGDFFN RRGRRPWASV NFITAHDGFT LNDLVTYNER HNEANGEDNN
DGHSDNRSWN CGVEGPTDDP DVIALRERQK RNLLATLLFS QGTPMMLAGD EFGRTQKGNN
NAYCQDNEIS WVDWEGLDDH GRALAEFVRK LTTLRHALPV LRRNRFLTGE MREDMGVKDV
KWLSPAGVEL TDEQWADTAM RCFGLVIDGR AQASGIRRPA SDATLLLVVN AYHDVVDFTL
PEIPGSDQWS CMIDTNAPDR DELPEFESGE AYQVTGRSLL LFALHAKGET KRIFQRLEER
LTE
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