| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5321 |
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| Symbol | |
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| ID | 6246806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2458043 |
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| End bp | 2460145 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642597042 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001861445 |
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| Protein GI | 186474103 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.293093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00147308 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCGA GAGATAGCCA GCGCGCGCAG GCAAGCTGTG GGCGCGACAC GAAGCAAGCC
GCGCGGCCGA CGCGCATCGG CACGCAAGCC GCACCGTTTG CGCACCGCGC GCATCTGATA
CAGGCGAGCG TCTGCGCATT GATGGGCGCC TGCCTGTGGG CAATGCCCGC CGCGCAGGCC
GCGAGCCAGG AGGCCGCGGG TCAGGCGCCG CTGCCGATGA CCATGGCGTC GAATGGCGGC
GCCGTGCATC TGACGATCGG CATGAGCGGC GCGGCGCCCG CAGCTGCCGC GGGCGTGGCG
CAGGGCGTCA AGGGCCCGAA CTGCACGGGC GCGATTGCCG ATCATCAGAC GGTGACGATT
CCCATCGGCA AATCGACGAT GGTCAACGTG CGCGAGTCGG TGAAGACGCG CACCGTCGGC
AATCCGTCCA TCGTGCAGGC AATGCTCGTG TCGCCGCAAA CGCTCTATCT GCTCGGCACC
GATGTCGGCA CGACCAACAT GATCGTGCAG GGCCGCAGCG GCTCGTGCAC GGTCATCGAC
GTCGCGGTGG GCGCCGATCC CGGCGGCCTG CAGCAGACGC TCGCCGTGCT GATGCCGGAG
GAGTCGGGCG TGCAGGTCAA GGCGGCCGCC GACACGCTCG TGCTGACGGG GACGGTGTCC
GACTCGGTGA AGGCAGAGCG CATCGTCGAG CTGGCGCGCG CCTATGTGGC GCGCCAGGCG
GCGCCCGTCC CCGTTGCCGC GCCCGCCAAT GCGGGCGGCG CGCAGGGCGG CGCGATGATT
CCCGCAGTGC TTAAGCCGGC GGGCGCATCG GGCAACGGCA ACAACGAGCG CATCGTCAAC
ATGATGCACG TGGCCGCGCC GCAGCAGGTG ATGCTCGAAG TGAAAGTGGC CGAAGTGTCG
AAGACGCTGA TCGACCAGCT CGGCATGGCC GCGAACATTC AGGGCGGCAC GGGCAGCTGG
AGCTTCGGAC TGCTGGCCGA TTTCCTGTCG GGCGGCATGG GTGCGCTGCT CGGCTCGAAG
GCGAACAACA AGCCGCTCAA CTTCGCGATC GACGCGCAGA AGACCGACCA GCTCGTCAAG
GTGCTTGCCG AGCCGACCCT GATGGCGATC AGCGGCCAGG AAGCGAGTTT CCTCGCGGGC
GGGAGGGTGT TCATTCCCGT GCCGCAAAGC AACGGCGCGG CGGGCTCGAC GATCATCCTG
CAGGAAGAGA CATTCGGCGT TGGGCTGACC TTCACGCCGA CCGTGCTCGA CAACGGCCGC
ATCAATCTCA AGGTGTCGCC CGAAGTGTCG GAGCTGTCGC CGACAGGCGT CGCCGTCACG
GCGGGCACGG TCAGCACGAC GGCCGTGCTG CCCCTCATCA CCACGCGCCG CGCGTCGACC
ACGCTGCAGG TGTACGACGG CCAGAGCTTC GCGATCGGCG GTCTGATGAA GAGCAACGTG
ACGGGCACGC TGAAGGGCCT GCCGGGACTC GGCGAAGTGC CCGTGCTCGG CGCGCTGTTC
CGCAGCACGA ACTTCCAGGA GGACAAGACC GAACTTGTGT TCGTGGTGAC GCCGCGCCTC
GCGAAGCCGC TGCCGCAGAA CTACCCGCTG CCGACCGACC ACTTCGGCAA GGTCACGGAA
GCCGGCGTGT TCTTCACGGG CAACATGGAA GGCAAGAAGC CGCAGGCGCC CGCCGAAGCC
GTGCCGCCGT CGACGGGCGC CGCCGTGCCC GCCAATGCGA TCCCGTCGCC GATGCCCGTC
AGGGGCGGCC CGATCGCGAC GACGGGATCG GCTGCGCCTG TGGTGCTGAC ACCCGTCATC
ACGTCGCAAG GCACGACGGC GCCGACGCCC TTGCCCGCGC CCGAGCGCAC GCAGCCGGTG
TCGGACGCGA TCCGCGCACC CGCCACGCCG CGTGCGCCCG ATAACGGCAA TGGCAACGTC
GGCGACGGTT CGTCGCCCAT CACACGCGTC GAGCCTCCGG ACGTGCATAC GGCAGCCGTG
CCGACCGCGA GCGTGACTGC GCAGCCGCTG CCCGCAGTGG CCACGACAGC CGCTGCAACG
CCCGCCGCGC AGCCTGCCAC GCAGCAAGCC CACGAAAGCG GCGACAGCGC CCGCACCCAA
TAA
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| Protein sequence | MNARDSQRAQ ASCGRDTKQA ARPTRIGTQA APFAHRAHLI QASVCALMGA CLWAMPAAQA
ASQEAAGQAP LPMTMASNGG AVHLTIGMSG AAPAAAAGVA QGVKGPNCTG AIADHQTVTI
PIGKSTMVNV RESVKTRTVG NPSIVQAMLV SPQTLYLLGT DVGTTNMIVQ GRSGSCTVID
VAVGADPGGL QQTLAVLMPE ESGVQVKAAA DTLVLTGTVS DSVKAERIVE LARAYVARQA
APVPVAAPAN AGGAQGGAMI PAVLKPAGAS GNGNNERIVN MMHVAAPQQV MLEVKVAEVS
KTLIDQLGMA ANIQGGTGSW SFGLLADFLS GGMGALLGSK ANNKPLNFAI DAQKTDQLVK
VLAEPTLMAI SGQEASFLAG GRVFIPVPQS NGAAGSTIIL QEETFGVGLT FTPTVLDNGR
INLKVSPEVS ELSPTGVAVT AGTVSTTAVL PLITTRRAST TLQVYDGQSF AIGGLMKSNV
TGTLKGLPGL GEVPVLGALF RSTNFQEDKT ELVFVVTPRL AKPLPQNYPL PTDHFGKVTE
AGVFFTGNME GKKPQAPAEA VPPSTGAAVP ANAIPSPMPV RGGPIATTGS AAPVVLTPVI
TSQGTTAPTP LPAPERTQPV SDAIRAPATP RAPDNGNGNV GDGSSPITRV EPPDVHTAAV
PTASVTAQPL PAVATTAAAT PAAQPATQQA HESGDSARTQ
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