| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5314 |
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| Symbol | |
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| ID | 6246799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2452677 |
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| End bp | 2454185 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642597035 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001861438 |
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| Protein GI | 186474096 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.213298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00230622 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTCCA CTTGTACAAC GGGCGCTTCG GACCGCGCCG TGCTTTGTGT GGCATCGCTG
CCCGACGAAG CACTCGCGGC CTTCCTCGCC GATGCCGGAT GGCATGTCGT GCACGCCAGA
ACCACGGCGG CGGCGGAGAA GCTGCTCGAT CGCGGCGACA TCAAGGTCGG CCTCATCGCG
CTGCCCGACG ACGTGACGCA GCAGCAGCTA TCGGCGTTCG AGGCCTGCAT GCGTCACGGC
GAAGCGAACT GGATCGCGCA GATCGCGCCC GGCCACGCCA ACGACGAGCT CACTAGCCGC
TTCATCCTCG ACTACTGCTT CGACTTCGTC ACCGCCCCCT GCCTGAACGA CCGGCTGATC
TTCGCGCTCG GCCACGCGCA CGGGCTGTCC AACCTGCGGC GCGCGAGCTT CCGGCCGCAG
CCGTCGCTCG GCGCACACGG CATGGTCGGC CATTGCGAGC CGATGCAAAA GCTGTATCGG
CGGATCGAAA AATGCGCGCA GACGGATGCG CCCGTGTTCA TTGCGGGCGA ATCGGGCACG
GGCAAGGAAC TGACCGCGCG TGCCGTGCAC GACGGCTCGA CGCGCGCGCA GCAGGCGTTC
GTCGCGATCA ATTGCGCGGC GATCCCGCCC ACGCTGTTGC AGGCCGAACT GTTCGGCCAT
GAGCGCGGCG CCTTCACGGG CGCACTGCAA CGCAAGATCG GGCGGATCGA ACATGCGAAT
GGCGGCACGC TGTTCCTCGA CGAAATCGGC GACATGCCGC ACGAATGCCA GGCCGTGCTG
CTGCGCTTCC TGCAGGAAGG GACCATCGAG CGCCTTGGCG GTAATACGCC CATCAAGGTG
GACGTGCGCG TGATTTCGGC GACGCACGTG AATCTCGAAG CCGCCGTGAA GGACGGACGT
TTCCGCGCGG ACCTGTATCA CCGGCTATGC GTGCTGAGGC TCGACGAACC GCCTCTGCGC
GAGCGCGGCA ATGACATCCG CCTGCTCGCC GACTATGCGC TCAGCATGTA TCGCCAGGAC
GGCACGCACA AGATTCGCGG CTTCTCCAGC AGCGCGGTGG TCGCGCTGTC GAATTACGAC
TGGCCAGGCA ACGTGCGCGA GCTGATCAAT TGCGTGCGGC GCGCCGTCGT CATGGCGGAG
GGCCGCTTCA TCACGGAAGG GGATCTCGGC TTGCCGCAAG TGTCGAACGC GCGCACGCGC
ACGCTCGCCG AAATCCGCAC GGCCGCGGAA ATCGAAGCGA TCGAAGACGC ACTGCGAAGG
CACGGGCACA ACCTGTCGGG CGCAGCGGCC GACCTCGGCG TGTCGCGCGC GACGTTGTAC
CGGCTGATGA ACGCGAACAG GATGAATCCC GACGCGAACC CGCTGCGTCC GGCGCGGCGC
GCGGGCAGCG ATGGCCGCAC GGACGGTGTC GCGGACGGTG CCGACGGGGC GTCCGGCGCG
GGCAATCGGG AAGACGAACA GGCGGGCTCG CCCCGGGCGC ACGCCGTAGC GGCCGTATCG
GCCGACTGA
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| Protein sequence | MNSTCTTGAS DRAVLCVASL PDEALAAFLA DAGWHVVHAR TTAAAEKLLD RGDIKVGLIA
LPDDVTQQQL SAFEACMRHG EANWIAQIAP GHANDELTSR FILDYCFDFV TAPCLNDRLI
FALGHAHGLS NLRRASFRPQ PSLGAHGMVG HCEPMQKLYR RIEKCAQTDA PVFIAGESGT
GKELTARAVH DGSTRAQQAF VAINCAAIPP TLLQAELFGH ERGAFTGALQ RKIGRIEHAN
GGTLFLDEIG DMPHECQAVL LRFLQEGTIE RLGGNTPIKV DVRVISATHV NLEAAVKDGR
FRADLYHRLC VLRLDEPPLR ERGNDIRLLA DYALSMYRQD GTHKIRGFSS SAVVALSNYD
WPGNVRELIN CVRRAVVMAE GRFITEGDLG LPQVSNARTR TLAEIRTAAE IEAIEDALRR
HGHNLSGAAA DLGVSRATLY RLMNANRMNP DANPLRPARR AGSDGRTDGV ADGADGASGA
GNREDEQAGS PRAHAVAAVS AD
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