| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5298 |
|---|
| Symbol | |
|---|
| ID | 6246783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 2434462 |
|---|
| End bp | 2435013 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642597019 |
|---|
| Product | PfpI family intracellular peptidase |
|---|
| Protein accession | YP_001861422 |
|---|
| Protein GI | 186474080 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.145288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0507605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACG CACTCGCAGG ATGCAAGGTG GCCGTACTGG CCGTCGACGG ATTCGAACAG
GCCGAGTTGA CCGAACCGCG CCGCGCGCTC ATGGACGCAG GCGCGACCGT GCACGTAATT
TCTGCCAAAG CGGGGAAGAT TCAGGGCTTC AAGCATGTCG ACAAAGGCGA CAGCGTGGAT
GTCGATACCA CTTTCGACAA CGCCGCGCCG AACGACTACG ACGCCGTGGT GCTACCGGGC
GGTGTGGTGA ATGGCGACGC GATCCGTCTG CTGCCGAAGG CGCAGGCCTT CGTGAAGGCC
GTCGATCAGG CGAAGAAGCC GATTGCCGTG ATCTGTCACG GCACCTGGCT GCCCGTGTCG
GCGGGACTCG TCAAGGGCCG CACGGTGACG AGCTGGCCGA GCCTGCAGGA CGACATTCGC
AATGCGGGCG GCACGTGGGT CGACAAGGAA GTCGTCGAGG ACGGCAACTT CATCACGAGC
CGAAAACCCG ACGATCTGCC CGCGTTCAAC AGAACGCTGA TCGCGCAGCT GTCGAAGAAG
AAAGCAGCCT GA
|
|---|
| Protein sequence | MANALAGCKV AVLAVDGFEQ AELTEPRRAL MDAGATVHVI SAKAGKIQGF KHVDKGDSVD
VDTTFDNAAP NDYDAVVLPG GVVNGDAIRL LPKAQAFVKA VDQAKKPIAV ICHGTWLPVS
AGLVKGRTVT SWPSLQDDIR NAGGTWVDKE VVEDGNFITS RKPDDLPAFN RTLIAQLSKK
KAA
|
|---|
| |