Gene Bphy_5265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5265 
Symbol 
ID6246752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2393029 
End bp2394153 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content61% 
IMG OID642596988 
Producthypothetical protein 
Protein accessionYP_001861391 
Protein GI186474049 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.716255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0847369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTG CAAAAGAGCT TCGGCGCTAT CGCGCCTACC TCGCCGACGA GCGTCATAGC 
GCTGCAATCT ACGAAGCACT CGCAAAAGTT GAGGCGGACA ACCACCGTCG GCAGATTTTT
GCTGACCTTG CCGCAGCTGA GCGCGCGCAC GCGAAGGTCT GGTCCGACAA ACTGAAAGCG
AATGGCATGA AAGTACGGGA GCGGCAGACC CTGAAGACGC TTGTAATGAA AGCTCTCGTC
CGCACCCTTG GACCCGGGTT CGTTCTCCCG TCGCTCGCCG CGGCCGAGTT TGCCGATCGT
GACAAGTACG CCGGCAACCC CGAGACCGAG GGAATGGCAG TTGAAGAACG GCATCACGCG
AGCGTCGTGC AGAGGCTGGC GAACGCCGGT GGCGGAGAGC GAACGAAAGG CGCCGAAATC
GCGCAAGCGG AATCCTGGCA CCGGGGCGTG TCGTCGGGCA ACGATCTACG CGCCGCGGTA
CTCGGCGCTA ATGACGGACT GGTCTCAAAC TTCTGCTTGA TCATGGGTGT CGCTGGCGCC
GGCACAGGAA ACAAGGCAAT ACTTCTGACC GCGCTTGCGG GGCTGATCGC GGGCGCATGC
TCGATGGCAC TCGGCGAATG GCTGTCGGTC ACCAACGCAC GCGAACTTGC GCAGACGCAA
ATCGCGAAAG AAGCGGACGA GCTTGAACAC ACACCCGATG CGGAGGAGCA CGAGCTGACG
CTCATCTATC GGGCGAAAGG CCTCGATGCC GTCGAGGCTA AACGGGTGGC ATCGCAGCTT
ATGCGCGACA GGGACAAGGC GCTGGACGCG CTCACACGCG AGGAACTCGG CCTCGACCCT
GCGGAACTCG GCGGCAACCC CTGGTCGGCT GCTGCTGTCT CGTTCTTTCT GTTTGCGACG
GGCGCCATTT TTCCCGCTAT GCCATTTCTG TGGACATCAG GATTCGCCGC TATCGTCCAG
TGCATTGCAC TGAGCATCTT CGCACTAGCC GCCATTGGCG TATTTACATC GCTTTTCAAT
GGCCGCAGTG CAATTTTCTC AGCCATCCGC CAGGTGATTA TCGGACTTGC CGCGGCCGCA
TTCACATTCG GTGTGGGACA TCTCCTCGGC GTGTCGGTGT CCTGA
 
Protein sequence
MASAKELRRY RAYLADERHS AAIYEALAKV EADNHRRQIF ADLAAAERAH AKVWSDKLKA 
NGMKVRERQT LKTLVMKALV RTLGPGFVLP SLAAAEFADR DKYAGNPETE GMAVEERHHA
SVVQRLANAG GGERTKGAEI AQAESWHRGV SSGNDLRAAV LGANDGLVSN FCLIMGVAGA
GTGNKAILLT ALAGLIAGAC SMALGEWLSV TNARELAQTQ IAKEADELEH TPDAEEHELT
LIYRAKGLDA VEAKRVASQL MRDRDKALDA LTREELGLDP AELGGNPWSA AAVSFFLFAT
GAIFPAMPFL WTSGFAAIVQ CIALSIFALA AIGVFTSLFN GRSAIFSAIR QVIIGLAAAA
FTFGVGHLLG VSVS