Gene Bphy_5249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5249 
Symbol 
ID6246738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2376817 
End bp2377443 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content66% 
IMG OID642596974 
ProductHAD superfamily hydrolase 
Protein accessionYP_001861377 
Protein GI186474035 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.02389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTGC CTTCCGATAC GCACCGCCAG GCAGCCGTCT TCATCGACAA GGACGGCACG 
CTGCTCGAAG ACGTGCCGTA CAACGTCGAT CCAGAGCACA TGCGCTTCGA GTCCGGCGCG
TGTGAGGCGC TCGCCGAACT TGCATGTTGT CCGTTCAAGC TGATCGTCAT CAGCAACCAG
AGCGGTGTCG CGCTGGGCCG CTTCGATATC GGCGCGCTGG ACGCCGTCGA AGCCAAACTG
CGCGACATGT TCGCTTCGTG CGGCGCGACG CTCGACGCCG TGTACTGGTG TCCGCATCAT
CCCGACGGCA GCGTCGCTGC GTACGCACAG GCTTGCGACT GCCGCAAGCC CGCGCCCGGC
ATGCTATTGC GGGCGGCCAG AGAGCATGGC ATCGATCTGC ATGCGTCGTG GTTCGTCGGC
GACATCCTCG ACGACGTGGA GGCGGGCAAC CTCGCCGGTT GCCGGACGAT CCTGCTCGAC
AACGGCCACG AAACCGTATG GCGCCGCACG CAGTCGCGCA TGCCGACCGC GTATGCGCGC
GACCTGCATC GCGCGGCGCT GATGATCCTG CGTTATCAGG AACGCTGCGA CGCTGGCGAA
GCGCCTTCGC CGAGGCAGGC CGCATGA
 
Protein sequence
MPLPSDTHRQ AAVFIDKDGT LLEDVPYNVD PEHMRFESGA CEALAELACC PFKLIVISNQ 
SGVALGRFDI GALDAVEAKL RDMFASCGAT LDAVYWCPHH PDGSVAAYAQ ACDCRKPAPG
MLLRAAREHG IDLHASWFVG DILDDVEAGN LAGCRTILLD NGHETVWRRT QSRMPTAYAR
DLHRAALMIL RYQERCDAGE APSPRQAA