| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5237 |
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| Symbol | |
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| ID | 6246727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2360930 |
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| End bp | 2362594 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642596963 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001861366 |
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| Protein GI | 186474024 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0387802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACG ACCTCTGGTA CAAGAACGCA ATCATCTACT GCCTTTCCGT CGGCACGTTC
ATGGACGCCA ATGGCGACGG CATCGGCGAC TTCGCTGGGC TGATGCGCCG CCTCGATTAT
CTGCAGGGTC TCGGCATCAC CGCGATCTGG CTGATGCCCA TTCAGCCATC GCCCGGGCGC
GACAACGGTT ACGACGTCTC CGACTACTAC AACGTCGATC CGAAGTACGG CACGCTCGGT
GACTTCGCCG AATTCACTCA CGCCTGTGCC GAGCGTGGCC TGCGCGTGAT CATCGACCTG
GTAGTCAATC ACACTTCCGA CCAGCACCCG TGGTTCAAGG AAGCACGCAG CGATCCTGAT
TCGAAATATC GCGACTGGTA TGTGTGGGCG GACAAGAAGC CGCCCGACGC AACACACGGC
GTCGCATTCC CTGGCGTTCA GAAGTCGACA TGGAGTTTCG ACAAACGTGC AAGGCGCTGG
TATTTCCATC GTTTCTACGA TTTTCAACCA GACCTGAATA CCTCCAATCC TCACGTGCAG
GCGGAACTGC TGAAGATCAT GGGCTTCTGG ATCCAGCTTG GCGTTTCCGG ATTCCGCATG
GATGCAGTGC CCTTCGTCAT CGCAACGAAG GGGCCGAAAG TGCGCGAACC CGTCGAGCAA
TATGAAATGT TGCGGAGCTT TCGCGAGTTC CTGCAATGGC GCGAAGGTGA TGCGATCATT
CTGGCCGAAG CTAACGTCCT GCCGGATACC GACCTCGAAT ATTTCGGTGA AGAGGGCGAG
CGCTTGCCCA TGATGTTCAA CTTCCAGCTC AACCAGAACA CCTTCTATAC GCTTGCGACG
GGCGATACGA AGCCGTTGAA GCACGCCCTC CTCGCAACGA AGCCGCGGCC GCCAAGCGCG
CAATGGGGCG TGTTCCTGCG CAATCACGAC GAGCTCGATC TCGGTCGCCT CACGCCTGAG
CAACGCGCAG CCGTATTCGC TGCATTCGGT CCCGAGCCGG GCATGCAGCT TTATCAGCGC
GGCATCCGGC GCCGGCTCGC GCCGATGCTG GCAGGCGACA GGCGCCACCT TGAACTCGCC
TACAGCCTGA TGCTCAGTTT GCCGGGCACG CCCGTGTTCC GTTACGGCGA TGAAATCGGC
ATGGGCGACG ACCTGCGCCG GCCCGAGCGC GCATGTGCGC GTACTCCCAT GCAATGGTCG
ACCGAGCCGC AGGGAGGCTT CACCAAGCAC ACCCGGCCGC CCGTATCGGT CATATCCGGC
GGCCCTTATG GCTTTGAGCG CGTCAACGTT GCGACCCAGC GGCGCGACCC CAACTCGCTT
CTTAACTGGA TGGAGCGGAT GATCCGCATG CGCAAGGAAG TGCCGGAGAT CAGCTGGGGG
GATTTCGAAG TGCTGCGCAC ATCGCGAAGC GATGTGCTGG CGCTGTGTTA TCACTGGCGC
AACAACTCGG TTCTGTTTCT ACATAACTTC GCCGCCAAGG CGTGCACAGT GAAGTTTCGC
TCCGGCTGCA ACGAGCCGGT GGGCTGCCCG CTGATCAATC TGCTCTCCGA CGACCACAGC
CAGCCTGGCG ACGACGGCCG ACATGCAGTG GTGCTGGAGC CTTACGGTTA CCGCTGGTAC
AGGGTCGGCG GACTGGATTA TCTGCTGACG CGTTCCGAAA TATAA
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| Protein sequence | MLNDLWYKNA IIYCLSVGTF MDANGDGIGD FAGLMRRLDY LQGLGITAIW LMPIQPSPGR
DNGYDVSDYY NVDPKYGTLG DFAEFTHACA ERGLRVIIDL VVNHTSDQHP WFKEARSDPD
SKYRDWYVWA DKKPPDATHG VAFPGVQKST WSFDKRARRW YFHRFYDFQP DLNTSNPHVQ
AELLKIMGFW IQLGVSGFRM DAVPFVIATK GPKVREPVEQ YEMLRSFREF LQWREGDAII
LAEANVLPDT DLEYFGEEGE RLPMMFNFQL NQNTFYTLAT GDTKPLKHAL LATKPRPPSA
QWGVFLRNHD ELDLGRLTPE QRAAVFAAFG PEPGMQLYQR GIRRRLAPML AGDRRHLELA
YSLMLSLPGT PVFRYGDEIG MGDDLRRPER ACARTPMQWS TEPQGGFTKH TRPPVSVISG
GPYGFERVNV ATQRRDPNSL LNWMERMIRM RKEVPEISWG DFEVLRTSRS DVLALCYHWR
NNSVLFLHNF AAKACTVKFR SGCNEPVGCP LINLLSDDHS QPGDDGRHAV VLEPYGYRWY
RVGGLDYLLT RSEI
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