| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5227 |
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| Symbol | |
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| ID | 6246717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2352603 |
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| End bp | 2353604 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642596953 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001861356 |
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| Protein GI | 186474014 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00482218 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.128047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTT CTGTTCCAAC ATCTTTTTCA ATGCCGATGC GGTCGCGCCG GCGTGTGCTG
CGTTCGCTCG CTGCGGCGCC GCTCGCGATG GCGACCGCGT TGACGGGCGC ACGCAATGCG
CGCGCAGCGG ATGACGCGAC CCTCGTACTC GGCGATCAGG CGGGCGGGAC ACGGGCGCTC
GTCGAAGCGG CCAAGGTGCT CGACGGCGCA CCCTACGCTT ACCGCTGGGC GAACTTCCAG
GGCGCGGCGC CGTTGTTCGA AGCGCAGCGT GCAGGCTCCG TCGATCTCGC GCCAGCCGGC
GACCTGCCCG TTCTGGCAGC GGCCGTCGGC GACCCGACGC TGAAGATCGT GGCGACCCGG
ATCGGCTCGG GCGCGCAACT GGGCATTCTG GTCGGACCGA ATTCGACCAT TCGCACCGTC
GCTGACCTGA AGGGCCGCAC GGTATTCGTT TCGTCGGCGC GCGGCAGCAT TTCGCAGTTC
CAGTTGTACG GTGCACTTGC CGAAGCGGGA CTCACGAAAG ACGACGTGAC GGTGCGTTTC
ATCCTCCCCG TCGATGCATT TGCGGCCTTC GCATCGGGTG CGATCGAAGT CTGGGCGACG
TTCGATCCGT ACTACGGTAT CGCCGCCCAA CATGGCGGCC GCATCCTGCG CGACGGCTCC
GGCATCAATA GCGGATTGGG GTTCATCACC GCTTCGGGCG CGTCGTTGAG CGACCCGCGC
AAGCGTGCGG CCATTGCCGA CGTGCTGGTT CGCTATCAGC GCGCGGGCGA CTGGGCACTG
GCGAATCCCG ACGCGTACGC GCAAATCTAC GCATCGCTCA CACGCTCGCC ACTCGACGCC
GCGAAGCAGA TCACGAAGCG CGCGTCGCTG AAGCAGCATT TCGTCACCGA CGCGGACATC
GCGACGCTGC AGAAAGTCGC GGACCGCGCA CATCGGGATG CGATCTTGCC GCGCCGCATC
GACGTTCGCG CGATTTCCGA GACGCATCTT GCCAGCACAT GA
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| Protein sequence | MAASVPTSFS MPMRSRRRVL RSLAAAPLAM ATALTGARNA RAADDATLVL GDQAGGTRAL
VEAAKVLDGA PYAYRWANFQ GAAPLFEAQR AGSVDLAPAG DLPVLAAAVG DPTLKIVATR
IGSGAQLGIL VGPNSTIRTV ADLKGRTVFV SSARGSISQF QLYGALAEAG LTKDDVTVRF
ILPVDAFAAF ASGAIEVWAT FDPYYGIAAQ HGGRILRDGS GINSGLGFIT ASGASLSDPR
KRAAIADVLV RYQRAGDWAL ANPDAYAQIY ASLTRSPLDA AKQITKRASL KQHFVTDADI
ATLQKVADRA HRDAILPRRI DVRAISETHL AST
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