| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5226 |
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| Symbol | |
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| ID | 6246716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2351341 |
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| End bp | 2352327 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642596952 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001861355 |
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| Protein GI | 186474013 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000016746 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.239409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCTC CCGCACGACG CCGCTTGTTG ATTCGCGCCT CCGTGCTCGG CGCCGCGGCA
GCGGCACCCG GCCTCGGGTT TGCTTCCACG GCAACCTTGC GCATCGGTTA TCAGAAATCG
TCGACGTTGA TTGCGGTCCT GAAAGCGCGC GGGACGCTCG AATCGGTGCT CGCGCCGCTC
GGCGTCAACA TCAGCTGGAG CGAGTTCGCA AGCGGGCTGC CGCTGACGGA AGCACTGAAC
GCCGAGGCTG TCGACTTCAC CGCCGACGTC GCCGACACTG TGCCGATTTT TGCGCAGGCT
GCCAGCGCGC GCTTCGTCTA TGTCGCGCAG GAAGCGCCGT CACCGGGCGC GCAAGCGATC
CTCGTGAAAC GCGACGGCGC GCCGCGCTCG GTCGGCGATC TGCGTGGCAA AGACATCGCC
GTGACCAAGG CGGCGGGCAG TCACTACCTG CTGCTGGCCG CCCTGGCAAA AGCAGGCGTG
CCGGCGTCGG CGACACGCAT TCACTACCTC CCCCCCGCCG ATGGGCGCGC AGCGTTCGAG
CGTGGCAGTG TCGATGCGTG GGTCACCTGG GACCCATATG TCGCGTCCGT CGACCAGAAT
CCGGACGTGC GAGTTCTCGC GGACGGCAAA GGTCTCGCGT CGTACCAACG TTATTACCTG
GCATCGAGCC GGTTTGCCTC GGAGCGTCCC GACGTGATCG CGGTGCTGTT CCATCAGCTG
CGCGATACGG GGGCGTGGGT CCGCACGTCG CCGCAGGAGG CGGCGCGTTT GCTCGCGCCT
GTCTGGGGCC TCGATGTCGC GACGATCGCG CGCGCCAATG CGCGGCGGAG CTACCTCGTC
CGCGCGGTGG ACCGTGCGCA TTTCAGCGAG CAGCAACAGA TAGCCGACAC CTTTCTGCAT
GCGGGCCTTT TGCCCGCGCC CGTGAATACG TCGATCGCCA CGCGCTGGGA CTTCGAGCAA
AAACGCGCCG TCACGATCGG TGCGTGA
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| Protein sequence | MFSPARRRLL IRASVLGAAA AAPGLGFAST ATLRIGYQKS STLIAVLKAR GTLESVLAPL
GVNISWSEFA SGLPLTEALN AEAVDFTADV ADTVPIFAQA ASARFVYVAQ EAPSPGAQAI
LVKRDGAPRS VGDLRGKDIA VTKAAGSHYL LLAALAKAGV PASATRIHYL PPADGRAAFE
RGSVDAWVTW DPYVASVDQN PDVRVLADGK GLASYQRYYL ASSRFASERP DVIAVLFHQL
RDTGAWVRTS PQEAARLLAP VWGLDVATIA RANARRSYLV RAVDRAHFSE QQQIADTFLH
AGLLPAPVNT SIATRWDFEQ KRAVTIGA
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