Gene Bphy_5178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5178 
Symbol 
ID6246670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2294258 
End bp2294740 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID642596906 
ProductMarR family transcriptional regulator 
Protein accessionYP_001861309 
Protein GI186473967 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.638261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGG AGCCGAACGG AACCGTCGAA CAGGACCGCA CCGTGGATGA AACGCTGAGC 
GGCCATATCG CGCGCAATTG CCTGATGACG CGTGCCCGGC AAATCTCGCG TGTTCTGACT
TCCGTCTATG ACGATGCGCT GCGGCCGTTC GGCATCGTGG CGCCGCAGTT CTCATTGCTC
GTGCTCATAG CGGAGTTCGG GCACATTAGC CGCACGGATC TCGGTCGAAG AAACCATCAC
GAACGATCGA CGCTGACCAG GAATCTGCAG CCGCTGATCG TGCGGGGCTG GGTTGCCGAA
GGCGTTCCGG CAAGCGATGG CCGCAGCCGC CCTCTCTCGC TTACGCGTGA GGGCAAGGCG
CTGCTCAAAA GCGCTTCGAG CGCGTGGTCG GCTGCACAAA GCCATGCGAC GCGGCTCCTG
GGAGAAGCCG GTGCCCGTGA GCTCATGAAT ATCGCGCGCG ATTTGCCACT GCGCGTGGCC
TGA
 
Protein sequence
MQQEPNGTVE QDRTVDETLS GHIARNCLMT RARQISRVLT SVYDDALRPF GIVAPQFSLL 
VLIAEFGHIS RTDLGRRNHH ERSTLTRNLQ PLIVRGWVAE GVPASDGRSR PLSLTREGKA
LLKSASSAWS AAQSHATRLL GEAGARELMN IARDLPLRVA