Gene Bphy_5153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5153 
Symbol 
ID6247112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2267128 
End bp2267847 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content64% 
IMG OID642596882 
ProductGntR domain-containing protein 
Protein accessionYP_001861285 
Protein GI186473943 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.25689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.577182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGACA AACCCACCGA CCCTCGCCGC CTCTATCTGC AGATCGCGGA GAAGCTGCGC 
GATCTGATCG CGCAGCCGGA GTTCGCGCCG AACGGCCGCT TGCCTTCGGA GCGCGCACTC
GCGGCAGCGC TTGCGGTATC GCGCCCGTCG GTGCGCGAGG CGCTGGTTGC ACTGGAACTG
GAAGGGCTGG TCGAAATCCG CATGGGCTCG GGCGTCTACG TATGCGCAAT GCCGCAGACG
CACAGCAAGG AGCCCTTGTC GCGCGCCGAA CTCGGCGACA GCCTGCTCGA CATCATGGGT
GCGCGCTGTG TAATTGAAGG CTCGATCGCG GCGAGCGTCG CACCGTTTTG CAAAGCGAAG
GATCTGAAGC ACCTGCGCCA GCTGTACAAC GAAATGCAGC GCGAAGTTTC GGCGGGACGG
ATTCCGGTCG CCGCCGACCG CGCATTTCAT CTCGCGATCG CGCAGATGAC CGGCAACGAG
GTGCTCGTGC GCACCGTTAG TTCACTGTTC GATGCGCGAC ACAGTCCGCT GTCCGAAAAG
CTGCGCGGCC ATTTCGAAAA CGAGAGCACA TGGGGCGCGG TTCCTGACGA GCATCGCGTG
ATCCTCGAAG CGCTCGAAGC GCATGATCCG ATCCAGGCTC AGGCTAGCAT GCAGCGTCAT
CTGAAGATGT CGCTGGAACG GGTGATCGCC GGCGGGCGGC CGAATGCGCA GCGGCGCTGA
 
Protein sequence
MTDKPTDPRR LYLQIAEKLR DLIAQPEFAP NGRLPSERAL AAALAVSRPS VREALVALEL 
EGLVEIRMGS GVYVCAMPQT HSKEPLSRAE LGDSLLDIMG ARCVIEGSIA ASVAPFCKAK
DLKHLRQLYN EMQREVSAGR IPVAADRAFH LAIAQMTGNE VLVRTVSSLF DARHSPLSEK
LRGHFENEST WGAVPDEHRV ILEALEAHDP IQAQASMQRH LKMSLERVIA GGRPNAQRR