| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5143 |
|---|
| Symbol | |
|---|
| ID | 6246637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 2254243 |
|---|
| End bp | 2255166 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642596873 |
|---|
| Product | protein of unknown function LppY and LpqO |
|---|
| Protein accession | YP_001861276 |
|---|
| Protein GI | 186473934 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCGT TAAGACGCCT CTCGCAAGTA TTCGTCATTT CGATCGGTAT CTGTGCGACC
GCCAGTCAGG TTGAAGCACA ACAGCAGGGC ACAGTCGATG CCGGCCGCAT CGAGCAGATC
ACCGGTCTGA AAGGCACGTA TTCCAAACAG GAGAAGGTGT TCAAGATCTC GAAACCGCGC
AACGACGTGA AAGTCCAGGT AGACGGCTTG ACCATGCCAC CGTTCATGGG GCTGACGTCC
TATGCGGCAT TCAAACCCGC CCAGGGTTCG CAGGTCATGA TGATGGGCGA TACCGCCCTG
TTCGAAGATG AAGTCAATCC GGCAATGAGC GCTGCCCTCG ACGCCGGGCT GGAAGTGACC
GCGCTCCACA ACCACTTCTT TTTTGACCAG CCCAAGGTGT ACTTCATGCA TATCGGTGGC
CACGGTGACG CGGCCAAGCT CGCGGAGGGT GTCAAAAAGG TCTACGACCG GATAGCGGAG
GTCCGTTCTG CGCACGCCGA TCCTGAAAGC GCTTTTCCCG GACAGATTGC CAATCCGAGC
AGCATCAGTC CGGCGCCACT CGAAGTGGTA TTCGGGTCGA AGGGCCAGAC GAGCAAAGGC
ATGTTCAAGG TGGTCGTCGG CAGGACAGCC AGCATGCAGG GTGTGACCGT CGGCAACGAG
ATGGGTGTCA ACACGTGGGC CGCATTCGCC GGCACAGACG ACGAAGCAGT TGTCGATGGC
GATTTCGCGA TGCGCGAGAG CGAATTGCAG GCCGTGCTGA AGAGCATGCG CGCATCCGGG
ATCAATATCG TGGCAATCCA CCAGCACATG ACGGACGAGA CACCGCGCAT CCTGTTCCTG
CACTATTGGG GCAAGGGCAA GGCTGTCGAT CTGGCGAAGG GGGTCAAGGC CGCCCTGGAT
GCGCAAAGTG CAAGCGCGCG GTAA
|
|---|
| Protein sequence | MSSLRRLSQV FVISIGICAT ASQVEAQQQG TVDAGRIEQI TGLKGTYSKQ EKVFKISKPR
NDVKVQVDGL TMPPFMGLTS YAAFKPAQGS QVMMMGDTAL FEDEVNPAMS AALDAGLEVT
ALHNHFFFDQ PKVYFMHIGG HGDAAKLAEG VKKVYDRIAE VRSAHADPES AFPGQIANPS
SISPAPLEVV FGSKGQTSKG MFKVVVGRTA SMQGVTVGNE MGVNTWAAFA GTDDEAVVDG
DFAMRESELQ AVLKSMRASG INIVAIHQHM TDETPRILFL HYWGKGKAVD LAKGVKAALD
AQSASAR
|
|---|
| |