Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5110 |
Symbol | |
ID | 6246604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 2211930 |
End bp | 2212769 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642596840 |
Product | extracellular solute-binding protein |
Protein accession | YP_001861243 |
Protein GI | 186473901 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.539737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00536253 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGTATCT TTGCAGGCTG GAAGTGTCGT CTCGCGATGG TGGCGTTGTG TGCCGCCGCA TCTGTTGCAA GCGTCAGCGC ACACGCGGAA GACCAACTCG CGAAGGTCAG GAAAGCAGGC GAACTCGTCG TCGGCACGGA GATGCAGTTC GCGCCGTTCG ACTTTCTCGA GAACGGTCAG CAGGCAGGCT TCAATAAAGA CCTGTTCGCC GAAATCGGCA AAGAACTCGG CGTGAAGGTG CGCTTCATCG ATCTGCCCTG GCCAAGCGTG CTGCCCGGCC TCGAGGCAGG CAAGTTCGAC ATGGTGGGCG GTCCGCTCAC GGTGACGAAA GCGCGCATGG AGCGCTACAC GTACACACTG CCCGTCGCCG ACGCCACCGA CGCGCTGCTC AAGCGAGCAA ACGACGCATC CATCAAGCAG TCGTCGGATA TCGTCGGCAA GACGGTGGGT GCAGGCAAAG GCTCCGCGCA ACTCGACCAG TTGAAGGCCT ACATCGCGAC GCTGCCGAAG CAGCCCGAAG TGCGCGAATA CGTCGACAAC AACCAGGCAT ATGCAGACCT CGCGGCGGGC CGCATCGCTG CCGTCGCCAA CTCGATGACG AACATCGCGT ATGTCGCGAA GCAGCGCCCC GAAACGTTCG CCGTCGTGAC GCCGCCGTTC GGCGCAAAGG TGTACTTCGC GTACTGCCTG CGCAAGGACG CGGACAGCAA GCCGCTCGCC GATGCGTTCA ACGCCGCGCT CGTCAAGATG CACAACGACG GCCGTCTCGC GGCCTTGCAG AAGAAGTGGT TCGGCGTGAC GATGGACGCG CCCACCACGA TGCCGACACC CAACTACTGA
|
Protein sequence | MGIFAGWKCR LAMVALCAAA SVASVSAHAE DQLAKVRKAG ELVVGTEMQF APFDFLENGQ QAGFNKDLFA EIGKELGVKV RFIDLPWPSV LPGLEAGKFD MVGGPLTVTK ARMERYTYTL PVADATDALL KRANDASIKQ SSDIVGKTVG AGKGSAQLDQ LKAYIATLPK QPEVREYVDN NQAYADLAAG RIAAVANSMT NIAYVAKQRP ETFAVVTPPF GAKVYFAYCL RKDADSKPLA DAFNAALVKM HNDGRLAALQ KKWFGVTMDA PTTMPTPNY
|
| |